RNA id: TCONS_00064097


Basic Information

Item Value
RNA id TCONS_00064097
length 538
RNA type processed_transcript
GC content 0.40
exon number 2
gene id XLOC_032985
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 36479193 ~ 36502330 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTTTTCCACGAGCGAGGCGGCCAGCTTGGCTGCAGCTGTCCAAACCGGAGGGCCTTGGGAAGGGGAGGAGAGAAGCCTGGATTGGAGGACGGTGCACTTGGCAAAGGTCAGACACCCCAAGACAGCTTTGAGTGTGGGAACTGTCCGCGAAGGCATGTGCGAAATGCTCTGCTCTGTGGTATCGTTTTTCCTCCAAGGCTGCCTGAAGGGAGAAGCTCGatgaaagaaacaaagacaaagaaaaatgtttggaacaacttgagggtaagtaaatagtgaataaataaatttttgagtgaactatcccataTTTAGACTTAATAGTCAACTTAATAGTCAACTACTGTAGTTTCAATAGTTTCAACTCAATAGTTTCAAGCtacaaatttactttttttatttttgtcaactGTTCACTTTTAGGGCAACGGATTActgactttttaaagtaaagtaattaatagctttttagtaaaataagtcaagtaaaatgtatttaaaagtaaCCCTGGTTTGATTTTTTGAAGAGCACAActa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000141053

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065193 lncRNA downstream 85698 36386292 ~ 36393495 (-) True XLOC_032984
TCONS_00064095 lncRNA downstream 188568 36287538 ~ 36290625 (-) False XLOC_032983
TCONS_00065192 lncRNA downstream 189319 36287886 ~ 36289874 (-) True XLOC_032983
TCONS_00064096 lncRNA downstream 189332 36287871 ~ 36289861 (-) False XLOC_032983
TCONS_00064751 lncRNA downstream 354303 36121319 ~ 36124890 (-) True XLOC_032981
TCONS_00064099 lncRNA upstream 49406 36551736 ~ 36552747 (-) True XLOC_032986
TCONS_00065194 lncRNA upstream 118980 36621310 ~ 36628097 (-) True XLOC_032987
TCONS_00065195 lncRNA upstream 839998 37342328 ~ 37344594 (-) True XLOC_032992
TCONS_00064129 lncRNA upstream 1246225 37748555 ~ 37749697 (-) True XLOC_033005
TCONS_00065196 lncRNA upstream 1630181 38132511 ~ 38358080 (-) False XLOC_033006
TCONS_00064092 mRNA downstream 281141 36127505 ~ 36198052 (-) False XLOC_032982
TCONS_00064093 mRNA downstream 297078 36131031 ~ 36182115 (-) False XLOC_032982
TCONS_00064085 mRNA downstream 699845 35675784 ~ 35779348 (-) False XLOC_032978
TCONS_00064086 mRNA downstream 740357 35675874 ~ 35738836 (-) True XLOC_032978
TCONS_00064082 mRNA downstream 991013 35459369 ~ 35488180 (-) False XLOC_032977
TCONS_00064098 mRNA upstream 48753 36551083 ~ 36552844 (-) False XLOC_032986
TCONS_00064102 mRNA upstream 215655 36717985 ~ 36795219 (-) False XLOC_032988
TCONS_00064101 mRNA upstream 215655 36717985 ~ 36795219 (-) False XLOC_032988
TCONS_00064100 mRNA upstream 215655 36717985 ~ 36795219 (-) False XLOC_032988
TCONS_00064103 mRNA upstream 217833 36720163 ~ 36795160 (-) False XLOC_032988
TCONS_00064094 other downstream 281429 36178345 ~ 36197764 (-) True XLOC_032982
TCONS_00064091 other downstream 565686 35912621 ~ 35913507 (-) False XLOC_032980
TCONS_00064062 other downstream 1540486 34932623 ~ 34938707 (-) False XLOC_032969
TCONS_00064061 other downstream 1540500 34931950 ~ 34938693 (-) False XLOC_032969
TCONS_00064104 other upstream 231379 36733709 ~ 36733826 (-) True XLOC_032989
TCONS_00064105 other upstream 241804 36744134 ~ 36744251 (-) True XLOC_032990
TCONS_00064106 other upstream 267609 36769939 ~ 36770069 (-) True XLOC_032991
TCONS_00064111 other upstream 936925 37439255 ~ 37439370 (-) True XLOC_032996
TCONS_00064112 other upstream 944698 37447028 ~ 37447143 (-) True XLOC_032997

Expression Profile

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