RNA id: TCONS_00064243


Basic Information

Item Value
RNA id TCONS_00064243
length 110
RNA type miRNA
GC content 0.40
exon number 1
gene id XLOC_033058
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40653129 ~ 40653238 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCTATACTGCAGTAAAATCCTCTGATTTGTGTCTTACCAGGCAAGTTTAGATGTTGATACTGTGTCTAATACTGCCTGGTAATGCCATCAATCACTGGGAATTTGATCGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118019

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065210 lncRNA downstream 23968 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065209 lncRNA downstream 24007 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00064236 lncRNA downstream 79897 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065208 lncRNA downstream 170931 40477430 ~ 40482198 (-) True XLOC_033052
TCONS_00064226 lncRNA downstream 218147 40432360 ~ 40434982 (-) False XLOC_033048
TCONS_00065211 lncRNA upstream 794 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065212 lncRNA upstream 6716 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065213 lncRNA upstream 202901 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065214 lncRNA upstream 202901 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065215 lncRNA upstream 207058 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00064242 mRNA downstream 1185 40647795 ~ 40651944 (-) False XLOC_033057
TCONS_00064238 mRNA downstream 69876 40578219 ~ 40583253 (-) False XLOC_033054
TCONS_00064239 mRNA downstream 71753 40578497 ~ 40581376 (-) True XLOC_033054
TCONS_00064234 mRNA downstream 79889 40572545 ~ 40573240 (-) False XLOC_033053
TCONS_00064237 mRNA downstream 79908 40572908 ~ 40573221 (-) True XLOC_033053
TCONS_00064248 mRNA upstream 36119 40689357 ~ 40697585 (-) True XLOC_033063
TCONS_00064249 mRNA upstream 53924 40707162 ~ 40713183 (-) False XLOC_033064
TCONS_00064250 mRNA upstream 53924 40707162 ~ 40713204 (-) False XLOC_033064
TCONS_00064251 mRNA upstream 55053 40708291 ~ 40713183 (-) True XLOC_033064
TCONS_00064252 mRNA upstream 62399 40715637 ~ 40722480 (-) False XLOC_033065
TCONS_00064240 other downstream 27709 40625304 ~ 40625420 (-) True XLOC_033055
TCONS_00064235 other downstream 79859 40572546 ~ 40573270 (-) False XLOC_033053
TCONS_00064217 other downstream 470609 40174216 ~ 40182520 (-) True XLOC_033043
TCONS_00064216 other downstream 490387 40093237 ~ 40162742 (-) False XLOC_033042
TCONS_00064176 other downstream 1127624 39524924 ~ 39525505 (-) True XLOC_033025
TCONS_00064244 other upstream 1491 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064245 other upstream 2765 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064246 other upstream 2966 40656204 ~ 40656288 (-) True XLOC_033060
TCONS_00064247 other upstream 14109 40667347 ~ 40667463 (-) True XLOC_033062
TCONS_00064261 other upstream 109519 40762757 ~ 40767671 (-) True XLOC_033067