RNA id: TCONS_00064246


Basic Information

Item Value
RNA id TCONS_00064246
length 85
RNA type miRNA
GC content 0.42
exon number 1
gene id XLOC_033060
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40656204 ~ 40656288 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGGATGCCTGGCTCCATCTTACAAGGCAGTTTTGGATGTTATATCTTCTCTAATACTGCCTGGTAATGATGCAGATGGTCATCTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118915

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065210 lncRNA downstream 27043 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065209 lncRNA downstream 27082 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00064236 lncRNA downstream 82972 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065208 lncRNA downstream 174006 40477430 ~ 40482198 (-) True XLOC_033052
TCONS_00064227 lncRNA downstream 221287 40432433 ~ 40434917 (-) True XLOC_033048
TCONS_00065212 lncRNA upstream 3666 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065213 lncRNA upstream 199851 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065214 lncRNA upstream 199851 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065215 lncRNA upstream 204008 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00065216 lncRNA upstream 307398 40963686 ~ 40968341 (-) True XLOC_033077
TCONS_00064242 mRNA downstream 4260 40647795 ~ 40651944 (-) False XLOC_033057
TCONS_00064238 mRNA downstream 72951 40578219 ~ 40583253 (-) False XLOC_033054
TCONS_00064239 mRNA downstream 74828 40578497 ~ 40581376 (-) True XLOC_033054
TCONS_00064234 mRNA downstream 82964 40572545 ~ 40573240 (-) False XLOC_033053
TCONS_00064248 mRNA upstream 33069 40689357 ~ 40697585 (-) True XLOC_033063
TCONS_00064249 mRNA upstream 50874 40707162 ~ 40713183 (-) False XLOC_033064
TCONS_00064250 mRNA upstream 50874 40707162 ~ 40713204 (-) False XLOC_033064
TCONS_00064251 mRNA upstream 52003 40708291 ~ 40713183 (-) True XLOC_033064
TCONS_00064252 mRNA upstream 59349 40715637 ~ 40722480 (-) False XLOC_033065
TCONS_00064245 other downstream 119 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064243 other downstream 2966 40653129 ~ 40653238 (-) True XLOC_033058
TCONS_00064240 other downstream 30784 40625304 ~ 40625420 (-) True XLOC_033055
TCONS_00064235 other downstream 82934 40572546 ~ 40573270 (-) False XLOC_033053
TCONS_00064217 other downstream 473684 40174216 ~ 40182520 (-) True XLOC_033043
TCONS_00064247 other upstream 11059 40667347 ~ 40667463 (-) True XLOC_033062
TCONS_00064261 other upstream 106469 40762757 ~ 40767671 (-) True XLOC_033067
TCONS_00064263 other upstream 139610 40795898 ~ 40819766 (-) True XLOC_033070
TCONS_00064277 other upstream 290069 40946357 ~ 40946475 (-) True XLOC_033076
TCONS_00064287 other upstream 424009 41080297 ~ 41085447 (-) False XLOC_033082