RNA id: TCONS_00064247


Basic Information

Item Value
RNA id TCONS_00064247
length 117
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_033062
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40667347 ~ 40667463 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

actggaagccatatcaccctgcagcccaagaccggttactcactgaagctaagcagggctgagcctggtcagaacCAAGATAGGGGACCACAAGGGAAAACtagattgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000174545

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065212 lncRNA downstream 6023 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065211 lncRNA downstream 8247 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065210 lncRNA downstream 38186 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065209 lncRNA downstream 38225 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00064236 lncRNA downstream 94115 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065213 lncRNA upstream 188676 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065214 lncRNA upstream 188676 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065215 lncRNA upstream 192833 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00065216 lncRNA upstream 296223 40963686 ~ 40968341 (-) True XLOC_033077
TCONS_00064283 lncRNA upstream 358765 41026228 ~ 41028618 (-) True XLOC_033080
TCONS_00064241 mRNA downstream 9694 40647788 ~ 40657653 (-) False XLOC_033057
TCONS_00064242 mRNA downstream 15403 40647795 ~ 40651944 (-) False XLOC_033057
TCONS_00064238 mRNA downstream 84094 40578219 ~ 40583253 (-) False XLOC_033054
TCONS_00064239 mRNA downstream 85971 40578497 ~ 40581376 (-) True XLOC_033054
TCONS_00064234 mRNA downstream 94107 40572545 ~ 40573240 (-) False XLOC_033053
TCONS_00064248 mRNA upstream 21894 40689357 ~ 40697585 (-) True XLOC_033063
TCONS_00064249 mRNA upstream 39699 40707162 ~ 40713183 (-) False XLOC_033064
TCONS_00064250 mRNA upstream 39699 40707162 ~ 40713204 (-) False XLOC_033064
TCONS_00064251 mRNA upstream 40828 40708291 ~ 40713183 (-) True XLOC_033064
TCONS_00064252 mRNA upstream 48174 40715637 ~ 40722480 (-) False XLOC_033065
TCONS_00064244 other downstream 9675 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064246 other downstream 11059 40656204 ~ 40656288 (-) True XLOC_033060
TCONS_00064245 other downstream 11262 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064243 other downstream 14109 40653129 ~ 40653238 (-) True XLOC_033058
TCONS_00064240 other downstream 41927 40625304 ~ 40625420 (-) True XLOC_033055
TCONS_00064261 other upstream 95294 40762757 ~ 40767671 (-) True XLOC_033067
TCONS_00064263 other upstream 128435 40795898 ~ 40819766 (-) True XLOC_033070
TCONS_00064277 other upstream 278894 40946357 ~ 40946475 (-) True XLOC_033076
TCONS_00064287 other upstream 412834 41080297 ~ 41085447 (-) False XLOC_033082
TCONS_00064312 other upstream 1741994 42409457 ~ 42418108 (-) False XLOC_033096