RNA id: TCONS_00064263


Basic Information

Item Value
RNA id TCONS_00064263
length 539
RNA type processed_transcript
GC content 0.56
exon number 4
gene id XLOC_033070
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40795898 ~ 40819766 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCATGAGGTAGAAGCTGCAGATTGTCTCCTTCCTGACCCCTGGACCTGTACTGATCTCGAGATGAGCCCGACGAAGGATTTGCCAGACATCTTCCTGTTGCGTGTCTGAATACCATCCTTCTTCATATTCTTTCGGTCATTTCTACAAGTGCCATCTTTTGGTGGGTTAAAAATTGCACACAGGAAGCAACTGTACAGATTTCTGGAGTGGAACACACTGGCGGGATACTCGTGCGCTCCGGCTACTGAGTAATCGGGATATGAAGGTATAGGGGTTGTCGTTTGCGCCAGATGCGGGTTGCTACGGATTGGACTGGAGCACTCCATCTTCATCCCGTCGACTAGATGGAGATGGTACTTCCCGGCATCCCTCACCGCGGCACAGGCCGGGTCCGGGGACACATCTTTGGGCGGGGTGGGCGGCAGGCAGTAGAGCTGTGCGCTGCAGTGTTGCGTCATCGACAGGCACGGCATCGGACCCGAGGCCGGCGCACCGGTGCCTGCGTACAGGCCGTTGGAGGATTCGGCGCCTGCTGAAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000156790

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065212 lncRNA downstream 134574 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065211 lncRNA downstream 136798 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065210 lncRNA downstream 166737 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065209 lncRNA downstream 166776 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00064236 lncRNA downstream 222666 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065213 lncRNA upstream 36373 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065214 lncRNA upstream 36373 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065215 lncRNA upstream 40530 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00065216 lncRNA upstream 143920 40963686 ~ 40968341 (-) True XLOC_033077
TCONS_00064283 lncRNA upstream 206462 41026228 ~ 41028618 (-) True XLOC_033080
TCONS_00064256 mRNA downstream 17604 40743367 ~ 40778294 (-) False XLOC_033067
TCONS_00064262 mRNA downstream 24085 40769517 ~ 40771813 (-) True XLOC_033069
TCONS_00064259 mRNA downstream 27172 40761626 ~ 40768726 (-) False XLOC_033067
TCONS_00064260 mRNA downstream 27244 40762429 ~ 40768654 (-) False XLOC_033067
TCONS_00064258 mRNA downstream 39760 40745667 ~ 40756138 (-) True XLOC_033068
TCONS_00064264 mRNA upstream 2821 40822587 ~ 40832245 (-) True XLOC_033071
TCONS_00064265 mRNA upstream 21390 40841156 ~ 40842768 (-) True XLOC_033072
TCONS_00064266 mRNA upstream 24020 40843786 ~ 40854458 (-) False XLOC_033073
TCONS_00064267 mRNA upstream 24193 40843959 ~ 40851499 (-) True XLOC_033073
TCONS_00064268 mRNA upstream 57628 40877394 ~ 40884453 (-) False XLOC_033075
TCONS_00064261 other downstream 28227 40762757 ~ 40767671 (-) True XLOC_033067
TCONS_00064247 other downstream 128435 40667347 ~ 40667463 (-) True XLOC_033062
TCONS_00064244 other downstream 138226 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064246 other downstream 139610 40656204 ~ 40656288 (-) True XLOC_033060
TCONS_00064245 other downstream 139813 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064277 other upstream 126591 40946357 ~ 40946475 (-) True XLOC_033076
TCONS_00064287 other upstream 260531 41080297 ~ 41085447 (-) False XLOC_033082
TCONS_00064312 other upstream 1589691 42409457 ~ 42418108 (-) False XLOC_033096
TCONS_00064313 other upstream 1590458 42410224 ~ 42415662 (-) False XLOC_033096
TCONS_00064314 other upstream 1595600 42415366 ~ 42415879 (-) True XLOC_033096

Expression Profile

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