RNA id: TCONS_00064277


Basic Information

Item Value
RNA id TCONS_00064277
length 119
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_033076
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40946357 ~ 40946475 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatatcaccctgcagcccaagaccagttactcactgaagacaagcagggctgaacctggtcagtatctggatgggagaccacatgggaaaactttGGGTTGCTGTTGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000117074

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065214 lncRNA downstream 82279 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065213 lncRNA downstream 82470 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065215 lncRNA downstream 82636 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00065212 lncRNA downstream 285033 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065211 lncRNA downstream 287257 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065216 lncRNA upstream 17211 40963686 ~ 40968341 (-) True XLOC_033077
TCONS_00064283 lncRNA upstream 79753 41026228 ~ 41028618 (-) True XLOC_033080
TCONS_00064291 lncRNA upstream 140133 41086608 ~ 41091181 (-) False XLOC_033082
TCONS_00065217 lncRNA upstream 140154 41086629 ~ 41091448 (-) True XLOC_033082
TCONS_00065218 lncRNA upstream 505195 41451670 ~ 41452888 (-) True XLOC_033085
TCONS_00064276 mRNA downstream 23386 40900053 ~ 40922971 (-) True XLOC_033075
TCONS_00064275 mRNA downstream 24945 40898877 ~ 40921412 (-) False XLOC_033075
TCONS_00064274 mRNA downstream 24945 40898877 ~ 40921412 (-) False XLOC_033075
TCONS_00064272 mRNA downstream 46739 40884615 ~ 40899618 (-) False XLOC_033075
TCONS_00064273 mRNA downstream 46739 40884618 ~ 40899618 (-) False XLOC_033075
TCONS_00064278 mRNA upstream 29180 40975655 ~ 40990473 (-) False XLOC_033078
TCONS_00064279 mRNA upstream 31493 40977968 ~ 40992683 (-) True XLOC_033078
TCONS_00064280 mRNA upstream 68316 41014791 ~ 41021880 (-) False XLOC_033079
TCONS_00064281 mRNA upstream 72090 41018565 ~ 41021571 (-) True XLOC_033079
TCONS_00064282 mRNA upstream 77105 41023580 ~ 41028698 (-) False XLOC_033080
TCONS_00064263 other downstream 126591 40795898 ~ 40819766 (-) True XLOC_033070
TCONS_00064261 other downstream 178686 40762757 ~ 40767671 (-) True XLOC_033067
TCONS_00064247 other downstream 278894 40667347 ~ 40667463 (-) True XLOC_033062
TCONS_00064244 other downstream 288685 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064287 other upstream 133822 41080297 ~ 41085447 (-) False XLOC_033082
TCONS_00064312 other upstream 1462982 42409457 ~ 42418108 (-) False XLOC_033096
TCONS_00064313 other upstream 1463749 42410224 ~ 42415662 (-) False XLOC_033096
TCONS_00064314 other upstream 1468891 42415366 ~ 42415879 (-) True XLOC_033096
TCONS_00064318 other upstream 2006284 42952759 ~ 42970918 (-) True XLOC_033098

Expression Profile

//