RNA id: TCONS_00064371


Basic Information

Item Value
RNA id TCONS_00064371
length 924
RNA type processed_transcript
GC content 0.39
exon number 3
gene id XLOC_033121
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 46168017 ~ 46251940 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCACCTATTCACTTCCAATAGACTCAGGAAGTAAACAGCAATTAGTGATTCGGTACATCAGTTATCCGCGTTGCTTTTGCTGGAGCAGATGTCTAAAATgGTCACCAGAGAGCGCTCCAGAAGTACAGGCAGATGGCTCACACCCTACACGCTCAAAACACTGTGACAATCCCCAACAGCTCCTCCGAGAGAAGGGACACACACGGCATCTCCTAATAAGTGGCAGTGCTGAAAGCGGAGTCGTCAGCACCATGGATAATGCATGACGGCTTGGCAAACCTTCAGCACCTCGGACAGCGGCGGCACCGCGTCAAGCAGCAATGCCTCTTCTGACAGCACAACTCAATATAGCTGTACAATGTTTTAACTCAACTCTTGGCAAGTGGGAAATGTGAGGCCTGCTGAAATCtgagaagcacagaatatgccgTGTAAACCTTCTGTCTACATTGCAGGGTAATTTTTGGCTCCCCTGTCTGCTGGTGAAGAGTGCAGAGCTGAATGACAATGCAATGTCTGTTGAGTTCTGCTTAAGGTGGAGAGATGTGATGTAAATGAGGGCATGCTAACAAATTTAACAGAAAACCATCAGTCTTGTGTTtaaattaagatgttttattttttaaaggttaaAGTTGTAGGTCACAATTCTAAAGGTGTTTCAATTTATATGGGTTTCTATGGGATTTTTGGTTTTACATTATATTAGTAAGGAGGAGCAAAGACAATATTAGaactattacatttatttaagatTATGGAGAAAATTATTACACTTTGGTACTCACTTTAAAAAACTACTGTGTCAAAActttgtaaacataaaaaaacaaatcatacatatcgataataaaaacatattattttagagtttttttttctagtcATGTAATagatatacaaacaaataaataaatgctaatc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000155271

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064370 lncRNA downstream 5432 46102214 ~ 46162585 (-) True XLOC_033120
TCONS_00065222 lncRNA downstream 238842 45923942 ~ 45929175 (-) True XLOC_033118
TCONS_00064365 lncRNA downstream 288877 45875242 ~ 45879140 (-) True XLOC_033117
TCONS_00064354 lncRNA downstream 2165475 43979711 ~ 44002542 (-) False XLOC_033111
TCONS_00065221 lncRNA downstream 2165476 43988556 ~ 44002541 (-) True XLOC_033111
TCONS_00064373 lncRNA upstream 42421 46294361 ~ 46310011 (-) True XLOC_033123
TCONS_00064380 lncRNA upstream 316194 46568134 ~ 46571429 (-) True XLOC_033127
TCONS_00064398 lncRNA upstream 1583413 47835353 ~ 47838372 (-) True XLOC_033139
TCONS_00065223 lncRNA upstream 1727365 47979305 ~ 48051590 (-) False XLOC_033141
TCONS_00064401 lncRNA upstream 1727365 47979305 ~ 48061524 (-) False XLOC_033141
TCONS_00064367 mRNA downstream 5432 45951893 ~ 46162585 (-) False XLOC_033120
TCONS_00064368 mRNA downstream 114717 45952543 ~ 46053300 (-) False XLOC_033120
TCONS_00064369 mRNA downstream 172616 45972447 ~ 45995401 (-) False XLOC_033120
TCONS_00064366 mRNA downstream 218896 45937777 ~ 45949121 (-) True XLOC_033119
TCONS_00064364 mRNA downstream 262271 45874595 ~ 45905746 (-) False XLOC_033117
TCONS_00064374 mRNA upstream 101970 46353910 ~ 46398584 (-) False XLOC_033124
TCONS_00064375 mRNA upstream 104508 46356448 ~ 46403475 (-) True XLOC_033124
TCONS_00064376 mRNA upstream 206476 46458416 ~ 46474483 (-) True XLOC_033125
TCONS_00064377 mRNA upstream 255669 46507609 ~ 46560207 (-) False XLOC_033126
TCONS_00064378 mRNA upstream 255879 46507819 ~ 46565466 (-) True XLOC_033126
TCONS_00064360 other downstream 1887803 44254721 ~ 44280214 (-) True XLOC_033114
TCONS_00064349 other downstream 2277555 43790137 ~ 43890462 (-) False XLOC_033109
TCONS_00064351 other downstream 2277555 43847860 ~ 43890462 (-) False XLOC_033109
TCONS_00064350 other downstream 2277585 43832025 ~ 43890432 (-) False XLOC_033109
TCONS_00064352 other downstream 2277590 43879375 ~ 43890427 (-) True XLOC_033109
TCONS_00064391 other upstream 904362 47156302 ~ 47156416 (-) True XLOC_033135
TCONS_00064395 other upstream 1350659 47602599 ~ 47602715 (-) True XLOC_033138
TCONS_00064408 other upstream 2128305 48380245 ~ 48381223 (-) True XLOC_033145
TCONS_00064412 other upstream 2360094 48612034 ~ 48612150 (-) True XLOC_033148
TCONS_00064417 other upstream 2864079 49116019 ~ 49159094 (-) True XLOC_033153

Expression Profile

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