RNA id: TCONS_00064472


Basic Information

Item Value
RNA id TCONS_00064472
length 1916
RNA type mRNA
GC content 0.43
exon number 8
gene id XLOC_033188
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 52226682 ~ 52235118 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAACTAATTTCTTCTCTACCACGATTTGGCAACACTGGATTGGGTTACAACCATCCGTCCCGTTCTTCAAATAGCAGCTCCGAGGCTCGACAGCCGCTTCAGTCCcgaaaactgaaactgaaatttAATACCGCCCGTTTCATTAGACACACAGCCGGTAAAACGTGGTGCTCATCCCGACTAGCGTGTGTGTGAAAGGCGGAGAAGAGAATTTCTAGCATGTTCTAGGAGGAGGACGGACTGGTTATCTAGTATAGGTCTCTAGCTCGTTGTTAAATACAGTAACTGCTAACTTTAAACAGCCGATCACTAAAGCTCTTCCTTCAGCCTTTACTTTCCGGGTTTTTCCACCAACACGATTCTATAGGTGTTAACATGCCTCAGAAGCGGCGCACGCAGTCGTGGACGGATCTCAAACAAGCCGGTAACGAGTGCTTCAAAGCGGGTCAGTATGGAGAAGCGGTGACCCTCTACAGCCAGGCCATCCAGCAGCTGGAGAAATCTGGTCAGAAGAAAACTGAAGATCTGGGTATTTTGTACTCAAACAGGGCCGCCAGTTACCTGAAAGATGGAAACTGCAATGAATGCATTAAAGACTGCACGGCGTCGCTTGACTTGGTTCCATTTGGATTTAAAGCTCTGCTACGCCGTGCAGCAGCTTTTGAAGCTTTGGAGAGATACCGACAAGCATATGTGGACTACAAAACAGTTTTACAGATCGACTGGAACATACCAGCTGCTCACGATGGAGTCAACAGAATGACCAAGGCTTTGACAGAAATGGATGGACCATCATGGCGAGAGAAACTGCCCCCGATTCCTACCGTTCCAATGTCCGTAAAGGAAAAGTTAGGACAAGCCGCCAGTCCAGCCTCCAGCTCACAACAGAACAACGTGATCGACGACAAGAAAAAAGCACCAGGACCAGACGCTGTTAAAAAGGGCAGAACTTTAAAGGAAGAAGGCAACGCACTTGTGAAGAAGGGGGAACACAAGAAAGCCATGGAGAAGTACACACAGTCACTTGCTCAAGACCCCACAGAAGTCACAACCTACACAAACAGAGCTCTCTGCTATCTAGCCTTAAAGATGTACAAAGATGCGATTAGGGACTGCGAGGAGGCTCTTCGATTGGATTCTGCCAACATTAAAGCCCTTTACAGACGTGCCCAGGCATACAAGGAACTCAAAAACAAGAAGTCTTGTATTGAGGATCTCAATAGCGTACTCAAAATCGATCCAAACAACACAGCAGTGCAGAAGCTCCTGCAGGAAGTACAGAAGATGAAATGACTGCGAGTGTGATGTGGACACGAGGAAACTTCCCCCCCCAAGTGCCTCGTTGATTTGCCTTTCTGAGCTGCAACATTTGCTGTAAACTTCAGATATGCACATACATCATCATTTAAAACCCTTCACGTTAATATAGGAGCACTTGATTGGATGCTTTTTTTGCCATCGATACGCTATTGGCAGTCAAGTTTAAATTTGAAACTCCATCCTGTACTTGATTTGGTCAAACATGTTACCACTTAATTGATCTTTAATCAAACTTCAGCGTGATTTAGcatgtgatttgttttttttaatgtggaaTTATTTGCACATTGAACTGAATGCCTCATTCATTTTAACCTATTTCTACTGTTTCTCTTTAGACTTGAAGTTCAAATAGGCAAATAGTTTTAGGGCTGTATTTTCAACAAAATCAGTTTTGCTTAACTTTGTTTCAAAAAATTAGTTGTGGGTTAATTCCTGTTGAAAACATttaatgtttatatacatttgtaAAGTCTTGACACCTGTATTTATTGATGTTTCTTATGCCATTTTTTGCATCAAGATAATGTAAACGggtctgtatttaaataatgtgctgttATGCATCTGATAATAAAGGACAAGGTTCAGTATCA

Function

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process
GO:0005829 cytosol cellular_component
GO:0005739 mitochondrion cellular_component
GO:0031072 heat shock protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2081 Predicted to enable heat shock protein binding activity. Predicted to be involved in protein targeting to mitochondrion. Predicted to be active in cytosol and mitochondrion. Is expressed in alar plate midbrain region; myotome; optic tectum; optic vesicle; and retina. Orthologous to human TOMM34 (translocase of outer mitochondrial membrane 34).

Ensembl:

ensembl_id ENSDART00000001803

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065239 lncRNA downstream 192026 52026491 ~ 52034656 (-) True XLOC_033186
TCONS_00065238 lncRNA downstream 688134 51528763 ~ 51538548 (-) False XLOC_033181
TCONS_00065237 lncRNA downstream 1721244 50495622 ~ 50505438 (-) True XLOC_033174
TCONS_00065236 lncRNA downstream 1730799 50480139 ~ 50495883 (-) False XLOC_033174
TCONS_00065235 lncRNA downstream 1740177 50480139 ~ 50486505 (-) False XLOC_033174
TCONS_00064758 lncRNA upstream 1017761 53252557 ~ 53258068 (-) True XLOC_033203
TCONS_00064500 lncRNA upstream 1039044 53273840 ~ 53282573 (-) False XLOC_033204
TCONS_00064759 lncRNA upstream 1376319 53611115 ~ 53690618 (-) True XLOC_033208
TCONS_00065240 lncRNA upstream 1930136 54164932 ~ 54173201 (-) False XLOC_033212
TCONS_00065242 lncRNA upstream 1930136 54164932 ~ 54174073 (-) False XLOC_033212
TCONS_00064471 mRNA downstream 70255 52081752 ~ 52156427 (-) True XLOC_033187
TCONS_00064470 mRNA downstream 415587 51796296 ~ 51811095 (-) True XLOC_033185
TCONS_00064469 mRNA downstream 455048 51769760 ~ 51771634 (-) True XLOC_033184
TCONS_00064467 mRNA downstream 559943 51575924 ~ 51666739 (-) False XLOC_033183
TCONS_00064468 mRNA downstream 561228 51580256 ~ 51665454 (-) True XLOC_033183
TCONS_00064477 mRNA upstream 104752 52339548 ~ 52348651 (-) False XLOC_033189
TCONS_00064478 mRNA upstream 107392 52342188 ~ 52348585 (-) False XLOC_033189
TCONS_00064479 mRNA upstream 111081 52345877 ~ 52348562 (-) True XLOC_033189
TCONS_00064480 mRNA upstream 127599 52362395 ~ 52428826 (-) False XLOC_033190
TCONS_00064481 mRNA upstream 129683 52364479 ~ 52400896 (-) True XLOC_033190
TCONS_00064464 other downstream 685194 51531006 ~ 51541488 (-) True XLOC_033181
TCONS_00064457 other downstream 1470234 50754501 ~ 50756448 (-) True XLOC_033179
TCONS_00064456 other downstream 1479137 50744165 ~ 50747545 (-) True XLOC_033178
TCONS_00064455 other downstream 1481427 50744160 ~ 50745255 (-) False XLOC_033178
TCONS_00064454 other downstream 1481753 50742315 ~ 50744929 (-) False XLOC_033178
TCONS_00064491 other upstream 688577 52923373 ~ 52923489 (-) True XLOC_033198
TCONS_00064492 other upstream 798200 53032996 ~ 53033111 (-) True XLOC_033199
TCONS_00064499 other upstream 1039040 53273836 ~ 53279930 (-) False XLOC_033204
TCONS_00064524 other upstream 2271662 54506458 ~ 54506586 (-) True XLOC_033221
TCONS_00064525 other upstream 2272309 54507105 ~ 54507178 (-) True XLOC_033220

Expression Profile

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