RNA id: TCONS_00064522


Basic Information

Item Value
RNA id TCONS_00064522
length 1017
RNA type mRNA
GC content 0.52
exon number 2
gene id XLOC_033218
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 54459413 ~ 54465377 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGAAGAAGAAGTGTTGCTACAGATGACCAAGATGTCAACGCTCACAGTTACGGAGAGTTGGGAGAAGGTGGATTTGATGTACATTTCCATTGAAAGCACCATTGCTTTGGCGTCAGTGATTGGGAATGTGCTGGTGGTCCTGGTGGTGTGCTTGAACCAGGGTCTGCGGGACCCGACCTTCTGCTTTATTGTGTCTCTGGCGCTGGCTGATATTGCAGTGGGTGTTCTGGTCATCCCACTGGCGGTGGTCCTTAGTTTGGGTCTCAACACACAGTTTTACACCTGCCTCTTCATTTCTTGCCTGCTCGTCATGATCACACAGAGCTCCATCCTGTCCCTGCTGGCCATCGCCATCGATCGCTTCCTGCGCGTCAAGATCCCAACAAGGTACAACATCATCGTAACTCAAAGACGGGCGTGGGCAGCTGTGGGTTTGTGTTGGCTCATCTCTTTTCTGACTGGCTTAGTGCCTATGGCCGGTTGGCACCGCAGCCCACCCGGAAATGTCAGCACGACGCCAATCCAGTGCCAGTTCACCAACGTCATGCGCATGGATTACATGGTCTACTTCAACTTCTTCGTCTGGGTGGTGGTGCCGCTGACCATCATGATCGGTCTGTACGCCGAGATCTTCCGGGTGATCTGCCGGCAGCTCAATCGCCGAGCCGAGGCCACTTGCGACTCCAGCAAATATTACAGAAAAGAGCTGAAACTGGCGAAGTCTCTAGCACTCGTTCTGTTTCTTTTCGCGGTCTGCTGGCTGCCACTTCACATTATGAACAGCATTGTGTTTTTCTGCCCCACATGCAACGTGCCCAAGAGTGCTTTTTATGTGGGCATCTTCATGTCGCACATTAACTCTGCACTCAATCCCCTGGTGTACGCGTTTCGCATCCAGCGCTTCCGCGATACACTGATTCATATCATCCAGCGCTTTGTGCTCTGTAAAACACCATCAGCCATCCCGAACCAGCATGGCCCTGGACCCATCACAGAGAAAACACAAGTTCAATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000083823

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064516 lncRNA downstream 278766 54177073 ~ 54180647 (-) False XLOC_033213
TCONS_00065242 lncRNA downstream 285340 54164932 ~ 54174073 (-) False XLOC_033212
TCONS_00065241 lncRNA downstream 285340 54164932 ~ 54174073 (-) True XLOC_033212
TCONS_00065240 lncRNA downstream 286212 54164932 ~ 54173201 (-) False XLOC_033212
TCONS_00064759 lncRNA downstream 768795 53611115 ~ 53690618 (-) True XLOC_033208
TCONS_00065243 lncRNA upstream 32427 54497804 ~ 54522947 (-) False XLOC_033220
TCONS_00065244 lncRNA upstream 32427 54497804 ~ 54523253 (-) False XLOC_033220
TCONS_00065245 lncRNA upstream 32427 54497804 ~ 54523451 (-) False XLOC_033220
TCONS_00065246 lncRNA upstream 38413 54503790 ~ 54522300 (-) False XLOC_033220
TCONS_00065247 lncRNA upstream 41622 54506999 ~ 54521449 (-) False XLOC_033220
TCONS_00064521 mRNA downstream 14484 54438355 ~ 54444929 (-) True XLOC_033217
TCONS_00064520 mRNA downstream 25418 54430413 ~ 54433995 (-) True XLOC_033216
TCONS_00064519 mRNA downstream 110845 54325008 ~ 54348568 (-) True XLOC_033215
TCONS_00064518 mRNA downstream 169186 54280365 ~ 54290227 (-) True XLOC_033214
TCONS_00064517 mRNA downstream 278897 54177462 ~ 54180516 (-) True XLOC_033213
TCONS_00064523 mRNA upstream 16564 54481941 ~ 54486410 (-) True XLOC_033219
TCONS_00064526 mRNA upstream 295764 54761141 ~ 54796072 (-) True XLOC_033223
TCONS_00064528 mRNA upstream 339759 54805136 ~ 54815886 (-) False XLOC_033224
TCONS_00064527 mRNA upstream 339759 54805136 ~ 54815886 (-) False XLOC_033224
TCONS_00064529 mRNA upstream 341559 54806936 ~ 54826061 (-) False XLOC_033224
TCONS_00064499 other downstream 1179483 53273836 ~ 53279930 (-) False XLOC_033204
TCONS_00064492 other downstream 1426302 53032996 ~ 53033111 (-) True XLOC_033199
TCONS_00064491 other downstream 1535924 52923373 ~ 52923489 (-) True XLOC_033198
TCONS_00064464 other downstream 2917925 51531006 ~ 51541488 (-) True XLOC_033181
TCONS_00064457 other downstream 3702965 50754501 ~ 50756448 (-) True XLOC_033179
TCONS_00064524 other upstream 41081 54506458 ~ 54506586 (-) True XLOC_033221
TCONS_00064525 other upstream 41728 54507105 ~ 54507178 (-) True XLOC_033220
TCONS_00064531 other upstream 349544 54814921 ~ 54815037 (-) True XLOC_033225
TCONS_00064542 other upstream 1081758 55547135 ~ 55547270 (-) True XLOC_033236
TCONS_00064543 other upstream 1089885 55555262 ~ 55555396 (-) True XLOC_033237

Expression Profile

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