RNA id: TCONS_00064544



Basic Information


Item Value
RNA id TCONS_00064544
length 133
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_033238
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 55650119 ~ 55650251 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


gccagcacctaagctttttcaTCATAGTACACgcgctgctgatgatgtgacaataaaactgcagataagcagggctgcgcccggtcagttcctggatgggagaccacatgggaaagctaggttgctgcggGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120154

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00065253 lncRNA downstream 371956 55274006 ~ 55278163 (-) True XLOC_033230
TCONS_00065252 lncRNA downstream 621206 55022836 ~ 55028913 (-) True XLOC_033228
TCONS_00065251 lncRNA downstream 763408 54881724 ~ 54886711 (-) True XLOC_033227
TCONS_00065250 lncRNA downstream 763470 54876177 ~ 54886649 (-) False XLOC_033227
TCONS_00064761 lncRNA downstream 806690 54841396 ~ 54843429 (-) True XLOC_033226
TCONS_00064545 lncRNA upstream 164506 55814757 ~ 55827517 (-) True XLOC_033239
TCONS_00064762 lncRNA upstream 358927 56009178 ~ 56038817 (-) True XLOC_033242
TCONS_00065254 lncRNA upstream 411470 56061721 ~ 56073926 (-) True XLOC_033243
TCONS_00065255 lncRNA upstream 680020 56330271 ~ 56567912 (-) False XLOC_033245
TCONS_00065256 lncRNA upstream 737203 56387454 ~ 56389460 (-) True XLOC_033246
TCONS_00064541 mRNA downstream 64696 55449300 ~ 55585423 (-) True XLOC_033235
TCONS_00064540 mRNA downstream 226899 55396808 ~ 55423220 (-) True XLOC_033234
TCONS_00064539 mRNA downstream 250905 55396807 ~ 55399214 (-) False XLOC_033234
TCONS_00064538 mRNA downstream 296115 55332460 ~ 55354004 (-) True XLOC_033233
TCONS_00064537 mRNA downstream 302503 55327909 ~ 55347616 (-) False XLOC_033233
TCONS_00064546 mRNA upstream 202023 55852274 ~ 55864687 (-) True XLOC_033240
TCONS_00064547 mRNA upstream 259544 55909795 ~ 55997350 (-) False XLOC_033241
TCONS_00064548 mRNA upstream 295910 55946161 ~ 55958705 (-) True XLOC_033241
TCONS_00064549 mRNA upstream 447720 56097971 ~ 56111829 (-) False XLOC_033244
TCONS_00064550 mRNA upstream 450505 56100756 ~ 56103718 (-) True XLOC_033244
TCONS_00064543 other downstream 94723 55555262 ~ 55555396 (-) True XLOC_033237
TCONS_00064542 other downstream 102849 55547135 ~ 55547270 (-) True XLOC_033236
TCONS_00064531 other downstream 835082 54814921 ~ 54815037 (-) True XLOC_033225
TCONS_00064525 other downstream 1142941 54507105 ~ 54507178 (-) True XLOC_033220
TCONS_00064524 other downstream 1143533 54506458 ~ 54506586 (-) True XLOC_033221
TCONS_00064551 other upstream 888758 56539009 ~ 56539125 (-) True XLOC_033247
TCONS_00064553 other upstream 1613259 57263510 ~ 57263645 (-) True XLOC_033251
TCONS_00064559 other upstream 1863583 57513834 ~ 57519523 (-) True XLOC_033255
TCONS_00064565 other upstream 2119291 57769542 ~ 57769658 (-) True XLOC_033259
TCONS_00064577 other upstream 3486420 59136671 ~ 59136787 (-) True XLOC_033272