RNA id: TCONS_00064579


Basic Information

Item Value
RNA id TCONS_00064579
length 456
RNA type mRNA
GC content 0.49
exon number 3
gene id XLOC_033274
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 59255136 ~ 59271436 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGAAGATGGAGATCCTCAGAATGATGCACCGGCAGGCTAAAAAACACCCCGGGCTCATCCCTCAGTTCGTCTTCAtgtctgtgggtgtgtgtggaGCGTCTCTTTATCTGATCCGGCTGGCTCGAGGACCACACATcagCTGGGACAGGAGGAATAACCCAGAGCCATGGAACAAACTCAGCCCGACCCAGCAGCTGAAGGTAAACAACCCAGCACtgctctgtgatcagctgcagaCTGACAGCGCAGACGGAGCCGTCACTCCTGCTGTTCCCAGATCAGGAGATGCTAGCAAACACCTCTGACACacacatcacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattattattattattattattatttatttggtatAAATAGTGCACAGGAGGTTATTTCATCCATGGa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000126870

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065269 lncRNA downstream 91593 59168060 ~ 59171539 (-) True XLOC_033273
TCONS_00065268 lncRNA downstream 194229 59066955 ~ 59068903 (-) True XLOC_033271
TCONS_00065266 lncRNA downstream 209927 59050986 ~ 59053205 (-) False XLOC_033270
TCONS_00065267 lncRNA downstream 210493 59051400 ~ 59052639 (-) True XLOC_033270
TCONS_00065265 lncRNA downstream 210782 59050986 ~ 59052350 (-) False XLOC_033270
TCONS_00065270 lncRNA upstream 124577 59395847 ~ 59409082 (-) False XLOC_033277
TCONS_00064766 lncRNA upstream 137728 59408998 ~ 59421470 (-) True XLOC_033277
TCONS_00065271 lncRNA upstream 564360 59835630 ~ 59853683 (-) True XLOC_033281
TCONS_00065272 lncRNA upstream 702432 59973702 ~ 59974697 (-) False XLOC_033283
TCONS_00065273 lncRNA upstream 702432 59973702 ~ 59974747 (-) True XLOC_033283
TCONS_00064576 mRNA downstream 288113 58921240 ~ 58975019 (-) True XLOC_033268
TCONS_00064575 mRNA downstream 288122 58921240 ~ 58975010 (-) False XLOC_033268
TCONS_00064573 mRNA downstream 352730 58871600 ~ 58910402 (-) False XLOC_033267
TCONS_00064574 mRNA downstream 361580 58871966 ~ 58901552 (-) True XLOC_033267
TCONS_00064572 mRNA downstream 435019 58789586 ~ 58828113 (-) True XLOC_033266
TCONS_00064580 mRNA upstream 79187 59350457 ~ 59357256 (-) True XLOC_033275
TCONS_00064581 mRNA upstream 99551 59370821 ~ 59381391 (-) False XLOC_033276
TCONS_00064582 mRNA upstream 101542 59372812 ~ 59388625 (-) True XLOC_033276
TCONS_00064583 mRNA upstream 154878 59426148 ~ 59505589 (-) True XLOC_033278
TCONS_00064584 mRNA upstream 286231 59557501 ~ 59563597 (-) True XLOC_033279
TCONS_00064577 other downstream 126345 59136671 ~ 59136787 (-) True XLOC_033272
TCONS_00064565 other downstream 1493474 57769542 ~ 57769658 (-) True XLOC_033259
TCONS_00064559 other downstream 1743609 57513834 ~ 57519523 (-) True XLOC_033255
TCONS_00064553 other downstream 1999487 57263510 ~ 57263645 (-) True XLOC_033251
TCONS_00064551 other downstream 2724007 56539009 ~ 56539125 (-) True XLOC_033247
TCONS_00064585 other upstream 413875 59685145 ~ 59685261 (-) True XLOC_033280

Expression Profile

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