RNA id: TCONS_00065274



Basic Information


Item Value
RNA id TCONS_00065274
length 644
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id XLOC_033289
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 60267807 ~ 60269211 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaatgcacAACACTATCTgaatgacatcatcatcatcatcatctcaatGTGAATACAGCTATCAGCAGATGAAGAGCAGGATGAAGGTGCTTTAATGTAGTACAAGATCATTTTAATGTAGGTAATcgtttaaacacacacattcagcttTAATGTCCAGAGGACGTCCTGCAGTTTCTGAGGAAccatcaagtgtgtgtgtgtaatactgCGAGGCACACAATCTGTACAACACATTCAACAACACTGCCGTAATAAATAATCCAACCCACAACTGCAAAACCTGCATCACATCTCAagcacaacaacaaacaaacaacaacaacaacacgagTGTCCAGATAAACAAACGCAGAAGTCCAGCTTCATGACATCAGTAACGGTGAAGAGAACCCTTTCTCAGCTTCTGTGTTCAGCAGATCATACCTGAAGAACAGCGCCAGAGCTCGCTCGCTTGCTTTTATTCATTCCTGTCGTCTCTGGGGGCTCTGCTGAGGGTCTTTACTGCCCTCTGCTGGATGACTGCCGCAGCTTAATGACCCATTCACCGCTTGGGTTATTATTGTACAGGTCAAACAAATGAGTCTCTGG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00065273 lncRNA downstream 293060 59973702 ~ 59974747 (-) True XLOC_033283
TCONS_00065272 lncRNA downstream 293110 59973702 ~ 59974697 (-) False XLOC_033283
TCONS_00065271 lncRNA downstream 414124 59835630 ~ 59853683 (-) True XLOC_033281
TCONS_00064766 lncRNA downstream 846337 59408998 ~ 59421470 (-) True XLOC_033277
TCONS_00065270 lncRNA downstream 858725 59395847 ~ 59409082 (-) False XLOC_033277
TCONS_00064595 mRNA downstream 120290 60142619 ~ 60147517 (-) True XLOC_033288
TCONS_00064592 mRNA downstream 163179 60076456 ~ 60104628 (-) False XLOC_033287
TCONS_00064594 mRNA downstream 163179 60104291 ~ 60104628 (-) True XLOC_033287
TCONS_00064593 mRNA downstream 188256 60076457 ~ 60079551 (-) False XLOC_033287
TCONS_00064591 mRNA downstream 218535 60043053 ~ 60049272 (-) True XLOC_033286
TCONS_00064585 other downstream 582546 59685145 ~ 59685261 (-) True XLOC_033280
TCONS_00064577 other downstream 1131020 59136671 ~ 59136787 (-) True XLOC_033272
TCONS_00064565 other downstream 2498149 57769542 ~ 57769658 (-) True XLOC_033259
TCONS_00064559 other downstream 2748284 57513834 ~ 57519523 (-) True XLOC_033255
TCONS_00064553 other downstream 3004162 57263510 ~ 57263645 (-) True XLOC_033251

Expression Profile


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