RNA id: TU10024



Basic Information


Item Value
RNA id TU10024
length 317
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G7349
representative True

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24617946 ~ 24618262 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTCTATTTGAGCCCTGAAATGGTAAGACCACCTCGTGTTTGGATATACCTGTAGGGAAGACAGAGGGAACGTGGTCTGCATCTCCAGCCACCAGGGAGGGCACGATCCAGGTGAAGCCATAACCTGTGAGGCCCACAGAATGGGCCACCTCGAAGATAGTGCTTGCCTCCTCCTTTGTGCAGTACAGTAGAATTACAGGACTCTGCAGTTTCTTTAGTTGGTTTTGGATCTTGGAGTCTCCATCGTCTACTGACATGTCCAGTAGGAAGACTTCTTCTAGCTCCCAGCCGACAAAGCTGTTATCGATGGTACTGCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10023 lncRNA downstream 31627 24586026 ~ 24586319 (-) True G7348
TU10016 lncRNA downstream 60249 24557478 ~ 24557697 (-) True G7343
TU9994 lncRNA downstream 76540 24539964 ~ 24541406 (-) True G7325
TU9993 lncRNA downstream 78442 24536380 ~ 24539504 (-) True G7324
TU9951 lncRNA downstream 168632 24445180 ~ 24449314 (-) True G7292
TU10025 lncRNA upstream 4088 24622350 ~ 24622556 (-) True G7350
TU10026 lncRNA upstream 24561 24642823 ~ 24643103 (-) True G7351
TU10027 lncRNA upstream 33681 24651943 ~ 24652221 (-) True G7352
TU10020 lncRNA upstream 47123 24665385 ~ 24669297 (-) False si:ch211-243a20.3
TU10061 lncRNA upstream 143652 24761914 ~ 24763690 (-) True G7383
XM_039816669.1 mRNA downstream 157865 24458178 ~ 24460081 (-) True mb
XM_039816741.1 mRNA downstream 157898 24458178 ~ 24460048 (-) False mb
XM_039812086.1 mRNA downstream 180523 24435927 ~ 24437423 (-) True smdt1b
XM_039817000.1 mRNA downstream 208818 24398474 ~ 24409128 (-) True LOC120569117
XM_039805245.1 mRNA downstream 234635 24379120 ~ 24383311 (-) True LOC120561906
XM_039821437.1 mRNA upstream 47125 24665387 ~ 24669230 (-) True si:ch211-243a20.3
XM_039821542.1 mRNA upstream 69903 24688165 ~ 24693367 (-) True emp1
XM_039777008.1 mRNA upstream 138381 24756643 ~ 24759618 (-) False LOC120543531
XM_039815613.1 mRNA upstream 171736 24789998 ~ 24805687 (-) False slc34a2a
XM_039816371.1 mRNA upstream 171736 24789998 ~ 24805687 (-) True slc34a2a
TU9991 other downstream 82630 24532236 ~ 24535316 (-) True G7323
TU9657 other downstream 806982 23774725 ~ 23810964 (-) False palm3
TU9658 other downstream 837622 23774725 ~ 23780324 (-) False palm3
TU9637 other downstream 849105 23752026 ~ 23768841 (-) True G7071
XR_005638947.1 other downstream 903860 23711827 ~ 23714086 (-) False LOC120557242
TU10046 other upstream 137670 24755932 ~ 24759600 (-) True LOC120543531
TU10312 other upstream 1079999 25698261 ~ 25699557 (-) True G7589
TU10328 other upstream 1165682 25783944 ~ 25788229 (-) True G7603
TU10486 other upstream 1383262 26001524 ~ 26003263 (-) True G7722
TU10488 other upstream 1383262 26001524 ~ 26009217 (-) False G7722

Expression Profile