RNA id: TU10323



Basic Information


Item Value
RNA id TU10323
length 861
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G7600
representative True

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 25757405 ~ 25758265 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTGTTTGCTGTACTTGCTCCCAGTCTGGCAGCCATACTCTGAGCACTGGTCTGATCCCAGGGACATGGCATCTGCATTGCCACTGCCCccgctactgctgctgctggagccgGCACTCCCCACACAACCCCCACTGCCCACGAAGGTGTTGGAGGGAGGCAGGTCCTGGACCGCCTGGTGCTTCTTTCCTTCAGCTGGGGGGGAGTGGGGCTGCAGATTCACTGCGGGGAGAGGTGAGCTGGATTTGTAGTGCCTGGCCAGGTCTGGGCTTGACTGATGTCTCCTGCCGCCGCCCATCCGTGGGCTGCCGGGGTCACCGTCCATAGCACAGTAGCGGGCTGCCAGGCGCTCACTAGCACTGCTCAAATCCTCCTCATCGTCGTCATTGGCATGGCGACGCAGCCCGTTGACTGTGACGATACCGCTGTAGAGTGATCTGTCTGCCTTCCCTCCTCCTGCAGCTGCACCAATGCCACTTCCATTGCGTTTGTCCCGTCGCGGTTTGCGTCCACGGTCTGATCCTCTGCTGCAGCCAGCCTGTGGTTGGGCACCTGGAGGACTGAAGAAGTCCTCCTCTGGCTCCTTCTTTCCGGCCTCGTAGCCATTCTTGCCCTGAGCACCGCACTGCCGAGCTGTGACTACAAGGAGGATAACGAGGATGACCGCCGCAGCTCCCGCCAGGACACCGATAGCTACGCTGAGGCGCTGTTTCCCTAATGCACGCTCGCTGTCTGGGTCCCCTGCAATGTCCAGTGACAGTGGAGCCATCAGACTTCGGGCCACCTGAGGTGAGAGGTAGAGAAGAGaggaacaagagagagagaagatgcaGTGTAAAAGAGGAAAAGCAAGAAAAGGAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10322 lncRNA downstream 5064 25751170 ~ 25752341 (-) True G7599
TU10300 lncRNA downstream 158321 25598698 ~ 25599084 (-) True G7577
XR_005640720.1 lncRNA downstream 207653 25546135 ~ 25549752 (-) True LOC120568384
XR_005640729.1 lncRNA downstream 231726 25524855 ~ 25525679 (-) True LOC120568431
TU10271 lncRNA downstream 245052 25475443 ~ 25512353 (-) True G7551
TU10324 lncRNA upstream 20392 25778657 ~ 25778944 (-) True G7601
TU10325 lncRNA upstream 23904 25782169 ~ 25782601 (-) True G7602
TU10327 lncRNA upstream 25959 25784224 ~ 25788229 (-) False G7603
TU10387 lncRNA upstream 77362 25835627 ~ 25837814 (-) True G7646
TU10388 lncRNA upstream 79712 25837977 ~ 25838762 (-) True G7647
XM_039815686.1 mRNA downstream 175727 25576779 ~ 25581678 (-) True LOC120568214
XM_039815614.1 mRNA downstream 177644 25576779 ~ 25579761 (-) False LOC120568214
XM_039815800.1 mRNA downstream 228003 25512589 ~ 25529402 (-) True LOC120568337
XM_039783113.1 mRNA downstream 277695 25476830 ~ 25479710 (-) True LOC120547284
XM_039784368.1 mRNA downstream 286715 25467097 ~ 25470690 (-) True smim18
XM_039811521.1 mRNA upstream 38934 25797199 ~ 25808606 (-) True crmp1
XM_039811526.1 mRNA upstream 38934 25797199 ~ 25808605 (-) False crmp1
XM_039811534.1 mRNA upstream 38934 25797199 ~ 25807763 (-) False crmp1
XM_039800434.1 mRNA upstream 62789 25821054 ~ 25829233 (-) False ppp2r2ca
XM_039800417.1 mRNA upstream 62789 25821054 ~ 25829233 (-) False ppp2r2ca
TU10312 other downstream 57848 25698261 ~ 25699557 (-) True G7589
TU10046 other downstream 997805 24755932 ~ 24759600 (-) True LOC120543531
TU9991 other downstream 1222089 24532236 ~ 24535316 (-) True G7323
TU9657 other downstream 1946441 23774725 ~ 23810964 (-) False palm3
TU10328 other upstream 25679 25783944 ~ 25788229 (-) True G7603
TU10486 other upstream 243259 26001524 ~ 26003263 (-) True G7722
TU10488 other upstream 243259 26001524 ~ 26009217 (-) False G7722
TU10489 other upstream 243259 26001524 ~ 26009217 (-) False G7722
TU10490 other upstream 243259 26001524 ~ 26009217 (-) False G7722

Expression Profile