RNA id: TU10491


Basic Information

Item Value
RNA id TU10491
length 823
RNA type TUCP
GC content 0.41
exon number 5
gene id G7722
representative False

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 26001524 ~ 26009217 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCAGCTGAACCAAGAAAAGGAAAAGTAAAGGAAAGAAGGAACTGAGTAGAAAAATTCAGTACTAGAAAAAGCTCTTTTACTTTTCAATTCAGACTTCATCAGACGGCTTTCTGAAAGCCAATCTTTAGTGTTAATTGTTGCAGAATTTTGTAAAAGGCAAAAATGATGATCAGCAGAGTCCTTGTCGCCTCTATTGTGGTGTTCCTGGCCTTCCTGGCCGTCAGTGAAGCGATGAGTCTGAGAAGCCTGGGAGTGGAGCTGCACTGCCGCTGCATCCAGACAGAGAGCCAACCCATCGGCCGCCACATCGAGAAGGTGGAATTGATTCCTGCCAACTCCCATTGCGACGAGACTGAGATCATTGCCACTCTGAAAAAGACAGGCAAAGAGGTTTGCCTGGACCCTGAAGCTCCCTGGGTGAAGAGAGTGATTAATAAGATCCTGTCCAACAGAAGACGCTGAACAGACCAGGAGAGATGTGCTTCATGAGTCTGAGCCGTTTAAAGACAAATGAAAAGTACCAGAAAGTATTTGTTGTCATCACactcatttcattttaatacCAGAAGATTGCCTAATGTcctgattttcaaaatgttgaaaatgacAATTTACCCATTAAGGTTATGTTTGTATCAAACGTGTTATTTATTAACaagtatgtgtttatttgtaatgtcacttgtgtgtgttgtagccaATTACTCTCTGATGTCACTTGGCGGCTCTATTGTTATCTTGTCTAAAACTAATGAGTTCAACATATTTATTGATGTATTTATGGAACTTAAATGTATCTGGATTTAGTTGTGTAGCTGTGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10388 lncRNA downstream 162762 25837977 ~ 25838762 (-) True G7647
TU10387 lncRNA downstream 163710 25835627 ~ 25837814 (-) True G7646
TU10327 lncRNA downstream 213295 25784224 ~ 25788229 (-) False G7603
TU10325 lncRNA downstream 218923 25782169 ~ 25782601 (-) True G7602
TU10324 lncRNA downstream 222580 25778657 ~ 25778944 (-) True G7601
TU10495 lncRNA upstream 7243 26016460 ~ 26018100 (-) True G7726
TU10500 lncRNA upstream 11991 26021208 ~ 26110065 (-) True G7730
TU10507 lncRNA upstream 29074 26038291 ~ 26039107 (-) True G7737
TU10524 lncRNA upstream 66180 26075397 ~ 26077242 (-) False polq
TU10535 lncRNA upstream 126683 26135900 ~ 26136838 (-) True G7765
XM_039798925.1 mRNA downstream 1498 25961727 ~ 26000026 (-) False camk2d2
XM_039803457.1 mRNA upstream 20413 26029630 ~ 26034422 (-) True polr1e
XM_039803532.1 mRNA upstream 67815 26077032 ~ 26094244 (-) True polq
XM_039803558.1 mRNA upstream 68760 26077977 ~ 26094244 (-) False polq
XM_039803549.1 mRNA upstream 68760 26077977 ~ 26094244 (-) False polq
XM_039803540.1 mRNA upstream 68760 26077977 ~ 26094010 (-) False polq
TU10328 other downstream 213295 25783944 ~ 25788229 (-) True G7603
TU10312 other downstream 301967 25698261 ~ 25699557 (-) True G7589
TU10046 other downstream 1241924 24755932 ~ 24759600 (-) True LOC120543531
TU9991 other downstream 1466208 24532236 ~ 24535316 (-) True G7323
TU9658 other downstream 2221200 23774725 ~ 23780324 (-) False palm3
TU10502 other upstream 108015 26117232 ~ 26121649 (-) False adamtsl7
unassigned_transcript_61 other upstream 403075 26412292 ~ 26412363 (-) True trnap-agg
TU10744 other upstream 524635 26533852 ~ 26535736 (-) False LOC120566984
TU10756 other upstream 557850 26567067 ~ 26578805 (-) True smim14
TU10758 other upstream 558397 26567614 ~ 26578805 (-) False smim14