RNA id: TU2816


Basic Information

Item Value
RNA id TU2816
length 519
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G2010
representative False

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5231497 ~ 5353152 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTATTGTTACTGATAACAtgaatgaaaagaaataaaccTTTATGTACAGACAGCCGGGCTGGCTTCTATGATGTCTAAATATAATGTCTCTTTAATAACTCTCACTGTACACAATAAAGGACAACGATCATTTACAGGCACACTGAACGAGGCTCTGCTATTGGCCACAGAAGACAACGAAATATAAACGTGAAGAGAGTCCAGTGTGTGTTACagccgctgtgtgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtgtctctgtctgtgtgtgtgtctgtctgtgtgtgtgtgtctgtctgtatgtgtgtgtgtgtgtcggtgtgtgtgtgtctgtctgtctgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgcatgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639998.1 lncRNA downstream 87511 5200207 ~ 5200828 (-) True LOC120563682
TU2385 lncRNA downstream 164920 5118749 ~ 5123419 (-) False LOC120564103
TU2372 lncRNA downstream 191715 5075968 ~ 5096624 (-) True G1723
TU2344 lncRNA downstream 251814 5034505 ~ 5036525 (-) True G1705
TU2298 lncRNA downstream 462157 4821726 ~ 4826182 (-) True G1664
TU2855 lncRNA upstream 22340 5375492 ~ 5377786 (-) True G2034
TU2872 lncRNA upstream 62184 5415336 ~ 5415888 (-) True G2047
TU2883 lncRNA upstream 105629 5458781 ~ 5459073 (-) True G2056
TU2898 lncRNA upstream 148901 5502053 ~ 5507095 (-) True G2064
TU2904 lncRNA upstream 222700 5575852 ~ 5624485 (-) True G2070
XM_039807985.1 mRNA downstream 12643 5243915 ~ 5275696 (-) True LOC120563650
XM_039807848.1 mRNA downstream 137927 5148516 ~ 5150412 (-) True LOC120563591
XM_039808807.1 mRNA downstream 153034 5114020 ~ 5135305 (-) True LOC120564103
XM_039807374.1 mRNA downstream 222149 5037606 ~ 5066190 (-) True LOC120563200
XM_039807726.1 mRNA downstream 437765 4827103 ~ 4850574 (-) True LOC120563519
XM_039807930.1 mRNA upstream 48409 5401561 ~ 5407181 (-) True LOC120563624
XM_039807939.1 mRNA upstream 48409 5401561 ~ 5407146 (-) False LOC120563624
XM_039807947.1 mRNA upstream 48409 5401561 ~ 5407138 (-) False LOC120563624
XM_039807835.1 mRNA upstream 116911 5470063 ~ 5471326 (-) True LOC120563585
XM_039807973.1 mRNA upstream 118294 5471446 ~ 5472005 (-) True LOC120563643
TU2392 other downstream 137920 5149923 ~ 5150419 (-) False LOC120563591
TU2375 other downstream 190705 5097369 ~ 5097634 (-) True G1726
TU2366 other downstream 202821 5076606 ~ 5085518 (-) True G1722
TU2371 other downstream 210785 5076606 ~ 5077554 (-) False G1722
XR_005639982.1 other downstream 504423 4774817 ~ 4783916 (-) True LOC120563598
TU2877 other upstream 142886 5496038 ~ 5499938 (-) False LOC120563672
TU2878 other upstream 142886 5496038 ~ 5499938 (-) False LOC120563672
TU2879 other upstream 142886 5496038 ~ 5499938 (-) False LOC120563672
TU3000 other upstream 757987 6111139 ~ 6111592 (-) True G2146
TU2942 other upstream 849174 6202326 ~ 6206890 (-) False LOC120563747

Expression Profile