RNA id: TU2975


Basic Information

Item Value
RNA id TU2975
length 424
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G2126
representative True

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5911178 ~ 5912263 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAAACCGGAAGTATTATAAGCGGGCTGAGGCCATGGGCAACATGTGCTGCTGATACTCTGCAAAAGAAAGCATGGTGTATGCTTATCTCGTTTATCATCTGGCTGATAAAGGAACAAGGTTTCAAGAGAGGAAAACTATCCAGAAGACATGACAGTGACGATGACGAGAGCGCGACAATTTCCAGTGTAATCTCCATACAGGATTTAAACTGTTATAGCTCTGAGTCTCAGTGGAAAGAAATATGAGAACTGACTCAGAATCAAATGAAAACcgtgtttacattttgaatatgtgtgtgcataacAGAAGGTTGTTGTGATTTGATTTCACATTGACAATGTTTCACTAATGTTTAAAAGCTGTGTGGAGGTTTAAGTCAAAGAGTATTAATGAACTATGAATCATTGTTTAGTAATGCTTATT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2966 lncRNA downstream 41175 5869701 ~ 5870003 (-) True G2118
TU2953 lncRNA downstream 103329 5802850 ~ 5807849 (-) True G2105
XR_005640048.1 lncRNA downstream 115577 5793615 ~ 5795601 (-) False LOC120563981
TU2990 lncRNA upstream 149957 6062220 ~ 6063639 (-) True G2137
TU2995 lncRNA upstream 168392 6080655 ~ 6081592 (-) True G2142
TU3002 lncRNA upstream 204234 6116497 ~ 6158715 (-) True G2147
TU3019 lncRNA upstream 224064 6136327 ~ 6238233 (-) False G2152
TU3027 lncRNA upstream 246891 6159154 ~ 6159731 (-) True G2158
XM_039809799.1 mRNA downstream 5547 5899556 ~ 5905631 (-) True LOC120564640
XM_039808219.1 mRNA downstream 18385 5887469 ~ 5892793 (-) True LOC120563808
XM_039808121.1 mRNA downstream 36303 5813365 ~ 5874875 (-) False kif16ba
XM_039808209.1 mRNA upstream 27583 5939846 ~ 5944002 (-) True LOC120563798
XM_039808437.1 mRNA upstream 47064 5959327 ~ 5964163 (-) True LOC120563920
XM_039808260.1 mRNA upstream 57677 5969940 ~ 5972824 (-) True LOC120563835
XM_039808240.1 mRNA upstream 69880 5982143 ~ 6001326 (-) False LOC120563822
XM_039808247.1 mRNA upstream 69880 5982143 ~ 5987638 (-) True LOC120563822
TU2877 other downstream 411240 5496038 ~ 5499938 (-) False LOC120563672
TU2878 other downstream 411240 5496038 ~ 5499938 (-) False LOC120563672
TU2879 other downstream 411240 5496038 ~ 5499938 (-) False LOC120563672
TU2814 other downstream 606013 5288076 ~ 5305165 (-) False G2010
TU3000 other upstream 198876 6111139 ~ 6111592 (-) True G2146
TU2942 other upstream 290063 6202326 ~ 6206890 (-) False LOC120563747
TU3049 other upstream 354343 6266606 ~ 6267238 (-) True G2177
TU3116 other upstream 609243 6521506 ~ 6534312 (-) True G2219
TU3119 other upstream 609243 6521506 ~ 6534312 (-) False G2219

Expression Profile