Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3276 |
| length | 287 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G2342 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053112.1 |
| NCBI id | CM020909.1 |
| chromosome length | 48724115 |
| location | 6948269 ~ 6977637 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3274 | lncRNA | downstream | 9330 | 6922269 ~ 6938939 (-) | False | LOC120565104 |
| TU3270 | lncRNA | downstream | 58660 | 6889304 ~ 6889609 (-) | False | LOC120565104 |
| TU3257 | lncRNA | downstream | 60870 | 6886366 ~ 6887399 (-) | True | G2327 |
| TU3256 | lncRNA | downstream | 62432 | 6885076 ~ 6885837 (-) | True | G2326 |
| TU3251 | lncRNA | downstream | 88553 | 6857134 ~ 6859716 (-) | True | G2322 |
| TU3285 | lncRNA | upstream | 21534 | 6999171 ~ 7003007 (-) | True | LOC120571633 |
| TU3300 | lncRNA | upstream | 103610 | 7081247 ~ 7081468 (-) | True | G2360 |
| TU3303 | lncRNA | upstream | 107721 | 7085358 ~ 7086285 (-) | True | G2362 |
| TU3308 | lncRNA | upstream | 149165 | 7126802 ~ 7127409 (-) | True | G2367 |
| TU3362 | lncRNA | upstream | 188795 | 7166432 ~ 7167827 (-) | True | G2392 |
| XM_039810502.1 | mRNA | downstream | 9282 | 6889288 ~ 6938987 (-) | True | LOC120565104 |
| XM_039803634.1 | mRNA | downstream | 72032 | 6808752 ~ 6876237 (-) | False | vps54 |
| XM_039803641.1 | mRNA | downstream | 72032 | 6808752 ~ 6876237 (-) | False | vps54 |
| XM_039803626.1 | mRNA | downstream | 72032 | 6808752 ~ 6876237 (-) | True | vps54 |
| XM_039810402.1 | mRNA | downstream | 366671 | 6540642 ~ 6581598 (-) | True | spred2a |
| XM_039820724.1 | mRNA | upstream | 24867 | 7002504 ~ 7017659 (-) | False | LOC120571633 |
| XM_039823631.1 | mRNA | upstream | 163097 | 7140734 ~ 7155323 (-) | False | zgc:66455 |
| XM_039822887.1 | mRNA | upstream | 163097 | 7140734 ~ 7155323 (-) | True | zgc:66455 |
| XM_039811084.1 | mRNA | upstream | 181233 | 7158870 ~ 7223862 (-) | False | b3gnt2a |
| XM_039811094.1 | mRNA | upstream | 181233 | 7158870 ~ 7223862 (-) | True | b3gnt2a |
| TU3271 | other | downstream | 45920 | 6889934 ~ 6902349 (-) | False | LOC120565104 |
| TU3212 | other | downstream | 72056 | 6855291 ~ 6876213 (-) | False | vps54 |
| TU3213 | other | downstream | 72056 | 6855291 ~ 6876213 (-) | False | vps54 |
| XR_005640961.1 | other | downstream | 152661 | 6795494 ~ 6795608 (-) | True | LOC120569746 |
| XR_005640977.1 | other | downstream | 153553 | 6794604 ~ 6794716 (-) | True | LOC120569800 |
| unassigned_transcript_2 | other | upstream | 43937 | 7021574 ~ 7021645 (-) | True | trnae-uuc |
| unassigned_transcript_3 | other | upstream | 45480 | 7023117 ~ 7023188 (-) | True | trnae-uuc_1 |
| unassigned_transcript_4 | other | upstream | 54457 | 7032094 ~ 7032165 (-) | True | trnae-uuc_2 |
| unassigned_transcript_5 | other | upstream | 57532 | 7035169 ~ 7035240 (-) | True | trnae-uuc_3 |
| unassigned_transcript_6 | other | upstream | 58242 | 7035879 ~ 7035950 (-) | True | trnae-uuc_4 |
