RNA id: XM_039819171.1


Basic Information

Item Value
RNA id XM_039819171.1
length 2544
RNA type mRNA
GC content 0.56
exon number 14
gene id akt3b
representative True

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7648842 ~ 7690587 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGTCCTCCCAGTCAGATCTGGCTGAACGTGACGTGCCGACTCGGAGCCGAGCGAGGTTTCCTGGCGGAGCCGCGGAGGGAGCAGGAGCCGAGcggatctgtctgtctgtccgtgtgtctgtctgcccgccgccgccgccgccgcagTCTCTCGTCGGTctgggacacacacaaaaaaacctccTTTTTTCGGCTTCCACGGTCTGGACTCGGCATCAGCGGCTATGGATGCATCGCTGTCCTCCTCCTGTTTTCACCACTGAGGGACGTTACTCCGTCGGATGCTCCAGTGCccatagaggaggaggagggggggaggacGAGGAGGGGGGCATCCTTGTCATTCTTCGACTACAAGGCTGACTCACCGCTGGAGCGCCTGAACACAGAAcaagacgaagaagaagaagaagaagaagtttgagAGGACGAGGGAGTGAGGAACAGAAAGAGAGTAAGAGAAGGAAggcgggagggagggagaaaaagaggggaGATAGAAACAAAACTAAAAGAGGTTTAGGAAGActaggggagggagggggggggagagaccCAAGACAGCAAGAGAAAGTTGAGGTTGGGTCGGTCGGGGCGAGAAGAGGGAAGAGAAAGTGATTgtgggaaagagaaagagagaaagaaagaagacacCGGTACAGACTGAGCGGGAAAGAAGATCTGAGGTCAGGCGAGAGTTGGGCGCAGGTAGGGTGGGAGGCTGAGCGGCGGCCAGACGGAAAAGGCTGACTGAGCTTCGGCCGAACGAGCTGTCCCGccaccacccccccctccccagcaGCCGTCCCGGTCACCACACTGGGAGAACTGGGAGAACTGGGGACGAGGAGAAGCCACCATGAGCGACCAGAACGTCGTCAAGGAAGGCTGGGTCCAGAAAAGAGGTGAGTACATCAAGAACTGGCGACCGCGCTACTTTCTGCTGAAGACAGACGGCTCTTTCATCGGCTACAAGGACAAACCACAGGACTCCGACCTGGCCTACCCGCTCAACAACTTCTCCGTAGCAAAATGTCAGCTCATGAAGACAGAGCGGCCCAAGCCAAACACCTTCATCATCCGCTGTCTGCAGTGGACCACGGTCATCGAGAGGACTTTTCATGTCGACACTCCTGACGAGAGGGACGAGTGGGCGGAGGCCATCCAGATGGTAGCCGAGTCCCTGGccaaacaggaggaggagggcatCCTGAGCAGCCCCACCTCCCAGATCGAGAACGTCAACGAGGAGGAGATGGACACCTCCATCAGCCACTACAAACGAAAGACAATGAATGACTTTGACTATCTGAAGCTTCTGGGCAAAGGCACTTTTGGGAAAGTCATTCTGGTGAGGGAGAAGGCGAGTGGCACCTACTACGCCATGAAGATCCTCAAGAAGGAAGTCATCATAGCCAAGGATGAAGTtgctcacacactcacagaaagTAGGGTATTAAAAAACACTCGGCATCCATTCCTAACTTCTCTGAAGTACTCGTTCCAGACTAAGGATCGGCTGTGCTTTGTAATGGAGTACGTCAACGGAGGAGAGCTGTTTTTCCATTTGTCAAGAGAAAGAGTATTTTCGGAGGACCGCACCCGTTTCTACGGCGCTGAGATCGTCTCCGCTCTAGACTACCTGCATTCTGCCAAGATCGTCTATCGCGATCTGAAGCTGGAGAACCTCATGTTGGACAAAGACGGCCACATCAAGATCACAGACTTCGGCCTCTGCAAAGAAGGCATCACCGACACTGCCACCATGAAGACCTTCTGTGGAACCCCAGAGTACCTCGCTCCTGAGGTGCTGGAGGACAACGACTACGGGCGGGCGGTGGACTGGTGGGGCTTGGGGGTGGTGACGTACGAGATGATGTGCGGCCGCCTGCCGTTCTACAACCAGGACCACGAGAAGCTGTTCGAGCTCATCCTCATGGAGGAGATCAAGTTCCCGCGGACGCTGTCGGCCGACGCCAAGTCGCTGCTGTCGGGGCTGCTCATCAAGGACCCCAACAAacgGCTGGGCGGCGGACCGGATGACGCTAAGGAGATCATGCGACACAGTTTCTTTGGCACAGTCGACTGGCAGGACGTCTACGACAAGAAGCTGGTCCCGCCCTTCCAGCCCCAGGTCAGCTCCGAGACGGACACGCGCTACTTCGACGAGGAGTTCACAGCACAGACCATCACCATCACTCCGCCGGAAAAATATGACGAGGACGGGATGGACGCGGCCGACAACGAGCGGAGACCTCATTTCCCACAGTTCTCCTACTCAGCCAGCGGGCGGGAGTGAGCGGCCCagcaccccccccctccccctcgcCAGTATCGTCCCCCCATTCGTGGCCATTTTGAGGAAAACACGTAGCCATtttaggaagaagaagaaaagaaaaaaaaaaataccagtctcccctctttttctccttctctgCCTCCTCACAgacgggggggaaaaaaaagtctttttagGGACTTTAAAAAGAGGTTTTTGCACAGTGGGATAGACTCCAGCCGGTCtccccacacaaaaaaaaa

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04456 AKT; RAC serine/threonine-protein kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3815 lncRNA downstream 15498 7632374 ~ 7633344 (-) True G2743
XR_005640671.1 lncRNA downstream 207775 7433916 ~ 7441067 (-) True LOC120568185
TU3435 lncRNA downstream 210570 7436474 ~ 7438272 (-) True G2451
XR_005640658.1 lncRNA downstream 372299 7271819 ~ 7276543 (-) True LOC120568064
XR_005640135.1 lncRNA downstream 380453 7263691 ~ 7268389 (-) True LOC120564702
TU3824 lncRNA upstream 31350 7721937 ~ 7722318 (-) True G2750
TU3831 lncRNA upstream 72406 7762993 ~ 7763948 (-) False G2752
TU3843 lncRNA upstream 123206 7813793 ~ 7860439 (-) True G2759
TU3863 lncRNA upstream 245353 7935940 ~ 7938937 (-) False capn9
TU3850 lncRNA upstream 272679 7963266 ~ 7965265 (-) True G2766
XM_039818941.1 mRNA downstream 35140 7602033 ~ 7613702 (-) True cct4
XM_039817113.1 mRNA downstream 47303 7585395 ~ 7601539 (-) False fam161a
XM_039817105.1 mRNA downstream 47303 7585395 ~ 7601539 (-) True fam161a
XM_039815533.1 mRNA downstream 66818 7554032 ~ 7582024 (-) True xpo1a
XM_039815544.1 mRNA downstream 67630 7554032 ~ 7581212 (-) False xpo1a
XM_039804037.1 mRNA upstream 200120 7890707 ~ 7895739 (-) True LOC120561073
XM_039804049.1 mRNA upstream 224611 7915198 ~ 7931404 (-) False ltv1
XM_039804042.1 mRNA upstream 224611 7915198 ~ 7931403 (-) True ltv1
XM_039816074.1 mRNA upstream 245353 7935940 ~ 7957621 (-) True capn9
XM_039804856.1 mRNA upstream 278763 7969350 ~ 7979457 (-) True taf5l
XR_005640903.1 other downstream 76385 7572321 ~ 7572457 (-) True LOC120569585
XR_005640913.1 other downstream 90944 7557767 ~ 7557898 (-) True LOC120569612
XR_005640861.1 other downstream 276284 7331956 ~ 7372558 (-) True LOC120569296
TU3357 other downstream 408714 7225340 ~ 7240128 (-) True commd1
unassigned_transcript_11 other downstream 605824 7042947 ~ 7043018 (-) True trnae-uuc_9
TU3830 other upstream 49237 7739824 ~ 7763948 (-) True G2752
TU3971 other upstream 516665 8207252 ~ 8209535 (-) False G2840
TU3972 other upstream 516665 8207252 ~ 8209535 (-) False G2840
TU3973 other upstream 516665 8207252 ~ 8209535 (-) True G2840
TU4012 other upstream 793125 8483712 ~ 8501141 (-) False wipf2a

Expression Profile