RNA id: TU7616



Basic Information


Item Value
RNA id TU7616
length 775
RNA type TUCP
GC content 0.55
exon number 3
gene id epn3b
representative False

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17817507 ~ 17835761 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTGATTGTGTATGCTGTGCGTGCGTGGCCTGCCGGTGCTGTATGCGTGTGTGGGGCTGCCTGagtgagagagcagagagggagtGAGTGAGCCGTGTGCTCTGGCTTATCCTTGTCCTATGCGGATTTCACCACTGACTGCCGGCCCCGAGCGACTCGCATCATCCAGGTTAGGCCTGGGTTTAGACGCGTTTAGACAACATTCCCATTCAAGGGAACACTCACTGTTCGGCTCCTCTCTAGGAGCGGAGGGAGATCATTGTGGTTGCACTGCTGCTTAGCCGATCCCAGCGGTGGGCATAGCATATTATCGGGACTTGGAGAGAGGAGATAGCGGAGAGGCGAGGATGCTCAGTGGACAAGGCGAGAGATGAGTAATGGGCAAGGGGCGTCCTATAACTCCTGACAGAGAAGAGGAGCCTTCAATGCCATatacctctcctctcctcctccagtccACGTTCCCCCTTTCACCCCTTCTCTTCACTTGTTGAGTGGTTTTTCTCCCCCACTTTCTATCCCtccacatcctccatcacccgTCACCATGACAACCTCAGCCCTGCGTCGGCAGGTGAAGAATATTGTGCACAACTATTCAGAAGCGGAGATCAAGGTTCGCGAGGCCACCTCGAACGACCCCTGGGGCCCATCTTCGTCTCTCATGTCAGAGATCGCTGACTTGACATTCAATGTGGTGGCGTTTGCTGAGGTCATGGGCATGGTGTGGAAACGCCTCAATGACAGCGGCAAGAACTGGAGGCACGTCTACAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7604 lncRNA downstream 48679 17781780 ~ 17782013 (-) True G5616
XR_005639433.1 lncRNA downstream 90845 17738072 ~ 17739847 (-) True LOC120560178
TU7595 lncRNA downstream 95941 17703216 ~ 17734751 (-) True G5608
XR_005639432.1 lncRNA downstream 118504 17710639 ~ 17712188 (-) False LOC120560175
XR_005639436.1 lncRNA downstream 130303 17699260 ~ 17700389 (-) True LOC120560186
TU7632 lncRNA upstream 16903 17852664 ~ 17852981 (-) True G5638
XR_005638874.1 lncRNA upstream 44263 17880024 ~ 17881117 (-) False LOC120556582
TU7677 lncRNA upstream 131566 17967327 ~ 17968130 (-) True G5666
TU7694 lncRNA upstream 165664 18001425 ~ 18003156 (-) True G5679
TU7695 lncRNA upstream 169474 18005235 ~ 18008723 (-) True LOC120563150
XM_039796273.1 mRNA downstream 18117 17794352 ~ 17812575 (-) True b3gntl1
XM_039807194.1 mRNA downstream 41712 17782589 ~ 17788980 (-) True LOC120563097
XM_039802451.1 mRNA downstream 51415 17773284 ~ 17779277 (-) False LOC120560193
XM_039802441.1 mRNA downstream 51415 17773284 ~ 17779277 (-) True LOC120560193
XM_039802464.1 mRNA downstream 62517 17766923 ~ 17768175 (-) True LOC120560200
XM_039796386.1 mRNA upstream 143 17835904 ~ 17848037 (-) True LOC120556682
XM_039807378.1 mRNA upstream 703902 18539663 ~ 18548734 (-) True tecrb
XM_039807379.1 mRNA upstream 703903 18539664 ~ 18552834 (-) False tecrb
XM_039795885.1 mRNA upstream 788347 18624108 ~ 18629125 (-) True tmed1b
XM_039820999.1 mRNA upstream 810398 18646159 ~ 18648400 (-) True LOC120571862
TU7590 other downstream 116794 17710646 ~ 17713898 (-) True LOC120560175
TU6856 other downstream 1482770 16345770 ~ 16347922 (-) True LOC120558720
TU6504 other downstream 2401136 15426544 ~ 15429556 (-) False sdk1a
TU6236 other downstream 2926483 14901150 ~ 14904209 (-) False ubl5
TU6167 other downstream 3111590 14712203 ~ 14719102 (-) True LOC120555938
TU7631 other upstream 8175 17843936 ~ 17845404 (-) False LOC120556682
TU7664 other upstream 44107 17879868 ~ 17881759 (-) True LOC120556582
TU8084 other upstream 1049207 18884968 ~ 18890220 (-) True G5930
TU8138 other upstream 1136232 18971993 ~ 18982304 (-) False mcrip2
TU8277 other upstream 1673500 19509261 ~ 19545927 (-) False G6084

Expression Profile