RNA id: TU7631



Basic Information


Item Value
RNA id TU7631
length 570
RNA type TUCP
GC content 0.50
exon number 5
gene id LOC120556682
representative False

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17835904 ~ 17848037 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGGACCGGAAGGGCTTCGGTTTGATGAACAGGGAAGGGTTCTACCACACAGCATCTTGGGTAGTTTAGAGGATTTCAGAAGTTATCTGGAGGCCAAAGGGGAGACAGAGTTGGTGAAGCGAATACCAAAATCCCAGAGATATGCTCCATCTGAGGCCCCAGAGAGGCATCACTCTGAGCCTGTGGAGAATGGGCATGGCAACAAAAACATCCAGAGTAATGCCCTGCAGCATTGGCATACACATATGACGCAGCGCAGACAGCAGCAGGACTTCTTATCTGAGTTGCTCTACCGGCCAGTCGGAAACCTGCTGATGAACCAAGCTAACCGTTTCAGAGAAACTCAGGAGCAGAGGGAGCTTCTAAACCAAGTGATGCCACTCATCCACTCTGGATATGGTTACCGTGTGGGAAGTGAGTTTTGGAGTGTCCCCCAGCGTTATGGAGATGAAATGAGTGGCATCACAGCCACTCTGACTCAGACAGAGCAGGGCAGACGGGAGCCTGTCACACATGTAGGACAACCAGGCAGCATACTCCAGGAATCAGGAATAACTTTTACTGAGACTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7604 lncRNA downstream 61923 17781780 ~ 17782013 (-) True G5616
XR_005639433.1 lncRNA downstream 104089 17738072 ~ 17739847 (-) True LOC120560178
TU7595 lncRNA downstream 109185 17703216 ~ 17734751 (-) True G5608
XR_005639432.1 lncRNA downstream 131748 17710639 ~ 17712188 (-) False LOC120560175
XR_005639436.1 lncRNA downstream 143547 17699260 ~ 17700389 (-) True LOC120560186
TU7632 lncRNA upstream 7260 17852664 ~ 17852981 (-) True G5638
XR_005638874.1 lncRNA upstream 34620 17880024 ~ 17881117 (-) False LOC120556582
TU7677 lncRNA upstream 121923 17967327 ~ 17968130 (-) True G5666
TU7694 lncRNA upstream 156021 18001425 ~ 18003156 (-) True G5679
TU7695 lncRNA upstream 159831 18005235 ~ 18008723 (-) True LOC120563150
XM_039817081.1 mRNA downstream 8228 17817507 ~ 17835708 (-) False epn3b
XM_039817074.1 mRNA downstream 8228 17817507 ~ 17835708 (-) True epn3b
XM_039796273.1 mRNA downstream 31361 17794352 ~ 17812575 (-) True b3gntl1
XM_039807194.1 mRNA downstream 54956 17782589 ~ 17788980 (-) True LOC120563097
XM_039802451.1 mRNA downstream 64659 17773284 ~ 17779277 (-) False LOC120560193
XM_039807378.1 mRNA upstream 694259 18539663 ~ 18548734 (-) True tecrb
XM_039807379.1 mRNA upstream 694260 18539664 ~ 18552834 (-) False tecrb
XM_039795885.1 mRNA upstream 778704 18624108 ~ 18629125 (-) True tmed1b
XM_039820999.1 mRNA upstream 800755 18646159 ~ 18648400 (-) True LOC120571862
XM_039798130.1 mRNA upstream 830004 18675408 ~ 18702209 (-) False LOC120557593
TU7616 other downstream 8175 17830692 ~ 17835761 (-) False epn3b
TU7590 other downstream 130038 17710646 ~ 17713898 (-) True LOC120560175
TU6856 other downstream 1496014 16345770 ~ 16347922 (-) True LOC120558720
TU6504 other downstream 2414380 15426544 ~ 15429556 (-) False sdk1a
TU6236 other downstream 2939727 14901150 ~ 14904209 (-) False ubl5
TU7664 other upstream 34464 17879868 ~ 17881759 (-) True LOC120556582
TU8084 other upstream 1039564 18884968 ~ 18890220 (-) True G5930
TU8138 other upstream 1126589 18971993 ~ 18982304 (-) False mcrip2
TU8277 other upstream 1663857 19509261 ~ 19545927 (-) False G6084
XR_005640950.1 other upstream 1881717 19727121 ~ 19727332 (-) True LOC120569705

Expression Profile