RNA id: TU9627



Basic Information


Item Value
RNA id TU9627
length 345
RNA type TUCP
GC content 0.44
exon number 1
gene id G7065
representative True

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23572705 ~ 23573049 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCTGATCTGCTGTCTGTCAGTGTCTGCAGAAGTAGGTGATGCTGCCCGGTTGTTGTTACCTGCGTACCGCGCAGGTGTCAGCATCCCGCAGCCATATGGGGACTTCGCGTAAAAAGCCCCGACTGTCTGGTTGGTTGTCTGGCTGTTTGGGGGAGATCGCGTCTGCAAGCGAAGTTGAACTTCATCGTCTATCCtccgccaccaccaccaccgcccCAGTAATATCTGAACACTTGGTGTTGCACTCATCCCAGATTGAGCAAGATTATCCTTTTGGGGGTGGGGGAACGAATTTTCTTTTGGAAGAAGTCGGACAGTCCCTCCGGCCTATATTTTCCCCTATTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005638754.1 lncRNA downstream 1671 23567560 ~ 23571034 (-) False LOC120555765
XR_005638753.1 lncRNA downstream 1672 23567560 ~ 23571033 (-) False LOC120555765
XR_005638749.1 lncRNA downstream 1673 23567560 ~ 23571032 (-) False LOC120555765
XR_005638748.1 lncRNA downstream 1677 23567560 ~ 23571028 (-) False LOC120555765
XR_005638750.1 lncRNA downstream 1680 23567560 ~ 23571025 (-) False LOC120555765
TU9629 lncRNA upstream 3879 23576928 ~ 23577129 (-) True G7067
TU9631 lncRNA upstream 11151 23584200 ~ 23584522 (-) True G7069
TU9645 lncRNA upstream 161315 23734364 ~ 23739835 (-) False si:ch211-207j7.2
TU9681 lncRNA upstream 309700 23882749 ~ 23885720 (-) False LOC120562828
XR_005638830.1 lncRNA upstream 364360 23937409 ~ 23943368 (-) True LOC120556236
XM_039803707.1 mRNA downstream 16455 23543467 ~ 23556250 (-) True suz12b
XM_039803717.1 mRNA downstream 16455 23543467 ~ 23556250 (-) False suz12b
XM_039803699.1 mRNA downstream 16773 23543467 ~ 23555932 (-) False suz12b
XM_039807087.1 mRNA downstream 30744 23535582 ~ 23541961 (-) False atad5b
XM_039807077.1 mRNA downstream 30747 23535582 ~ 23541958 (-) False atad5b
XM_039794846.1 mRNA upstream 77574 23650623 ~ 23656256 (-) False LOC120555782
XM_039794864.1 mRNA upstream 77574 23650623 ~ 23655950 (-) False LOC120555782
XM_039794855.1 mRNA upstream 77574 23650623 ~ 23655789 (-) True LOC120555782
XM_039797373.1 mRNA upstream 84288 23657337 ~ 23685439 (-) False rab11fip4b
XM_039797366.1 mRNA upstream 84288 23657337 ~ 23685439 (-) True rab11fip4b
TU9432 other downstream 330415 23213856 ~ 23242290 (-) True G6943
TU9396 other downstream 407768 23088500 ~ 23164937 (-) True G6924
TU9329 other downstream 584205 22981925 ~ 22988500 (-) True G6881
XR_005640901.1 other downstream 1533554 22039009 ~ 22039151 (-) True LOC120569580
TU8945 other downstream 1862893 21708540 ~ 21709812 (-) True G6592
XR_005638947.1 other upstream 138778 23711827 ~ 23714086 (-) False LOC120557242
TU9637 other upstream 178977 23752026 ~ 23768841 (-) True G7071
TU9657 other upstream 201676 23774725 ~ 23810964 (-) False palm3
TU9658 other upstream 201676 23774725 ~ 23780324 (-) False palm3
TU9991 other upstream 959187 24532236 ~ 24535316 (-) True G7323

Expression Profile