RNA id: XM_039803681.1


Basic Information

Item Value
RNA id XM_039803681.1
length 2270
RNA type mRNA
GC content 0.50
exon number 11
gene id notum1b
representative True

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16985394 ~ 16995641 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCAACAGGTCGTCAGTGAAACTGGGCTGAACTACTGAAAAGAGGGACTTGAAGTACGCGCGTAATGACAGTTATACTGGCTCCTCGCGAATTCAGGACTAAAAAGATGTGGGAACTGCACGTGCATTTGAGGTGAATTTTAAACCAGCTCTCCATCTCTCATTGTACCATGGAGAACCATAACCTGAGTTCATTCTGCACACCTTTCATGAACGATAACTTCCAAGAAGTCTCTGTGCGTTTCCAAAGAACTTTTCACTTTTCTAACGACTCTTAGGACATGTTGTGTTTCACTGTCTCACTGTTCACAAGTCTCTTAAGTGCACACATTTGAAAGACGCAATTACATTTAGACAATTAGATATGCAGAGCCGTGGCGTGGTGAAAAGCCGGGCCGGTCTGTCCGCGGTGcgctgctgtttgctgctgctcTTCATCCATATGAGCGCACCGGTGGAGGCGAGGAGGGTACACGGCGCTCGGGCGCAGAGTCGGcgggtgcagcagcagcagcagcctccgGCACACAGGGAGCGGGTGGAAGGAGCAGAGAGCTTCCCGTTAGACTTTACAGCCGTGGAGGGCAACATGGACAACTTCATGGTACAGATAAAGAACTTAGCGCAGTCACTGTACCCGTGCTCTGCGCAGAAGCTGGATCAAGACATGAAGTTGCACTTTTTGAAGAATGTATCTGTGACTTGCAATGACGGTTCAGCAGCAGGATACTACATCAAGGAGTCTAAAGGCAGCAAGAGGTGGCTGCTGTTCTTAGAAGgtggatGGTACTGTTTCAACAGGCAGACCTGTGACAGCAGGTATGAGACGTTGAGGAGACTGATGAGCTCCACCAAGTGGCCACAAACCAAAACAGGAACAGGAATCCTGTCTCCCCAGCCAGAGGAAAACCCTCACTGGTGGAACGCCAACATGGTCTTCATCCCGTACTGCTCCAGTGATGTGTGGAGCGGCGCCACACCGAAGACAGATCACAGTGATTATGCGTTCATGGGCTCTCTGATTATTAAGGAGGTGGTGAACGAACTGCTGACAAAAGGACTGGACAACGCCAAGGTTCTGCTTCTGGCAGGAAGCAGTGCGGGCGGTACAGGTGTCCTGCTGAATGTGGACCACGTTGCAGAGCAGCTGGAGTCGCAGGGCCACCGAGGGGTGCAGGTCAGGGGCCTGGCTGACTCCGGATGGTTCCTGGACAACAAACAGTACAAATTAACAGACTGCCTGGACACCATCAGCTGTGCCCCCACTGAGGCCATAAAGAGAGGCATCAGGTACTGGGGCGGTCTGGTTCCAGAGAGCTGCAGACAGGCTCATGTGGGAGAGGAATGGAACTGTTTCTTTGGATATAAAGTCTTCCCCATGTTAAAAAGCCCGGTGTTTGTGGTGCAATGGCTGTTTGACGAGGCCCAGCTGACGGCCGACAACATCCACCTGACCGGGCAGCCCGTTCACGAGGGCCAGTGGAGGTACATACAGAACCTGGGACAGGAGCTGAGGAGTACACTACATGACGTACCGGCGATGTTTGCTCCGGCCTGTCTGACGCATGAACTCATTACTAGAACCTACTGGATGGACATTCAGGTGAAAGGCACCTCTCTGCCCAGAGCCCTCCACTGCTGGGACCGCAGCCTCCAAGCCAACAACCACATCAACGGCAGCAACCACAACCACCAAAAGCACAAGACCCAGCCTATGAGGGGTTGCCCTCTacatttgattgacagctgccCGTGGCCACACTGTAATCCCTCCTGCCCGACTATTCGGGACCAGCTGACGGGACAGGAGATGAGCGTGATCCAGTTCCTGAAGCACTTGGGCTTTGACGTGCAGAAGATGGCCCAGCAGCAGGGGATGGACCCCAGGAAACTACTGGGCATGCTCAATAACGGGAGCTGagtggcttctttttttttttttttttaaagcgcaGCAATGTTAGCGTAGCATCAGTAAGCCATTCTTCAGAGATAAGAAGATGTTGAACATCGATGGAAGACAACGGGAAAACATGAAAACAGAACTCCAATGAGAAAACTGTGAATACTTCCAAACATAGTCTTCCATCAATAACAAGCAAGACTCAGCTTTTGAAAAACTGAACGACTCAAAAATGTACAAGTGCCTGATAAGTTTTGAAGATATTGTTGCGTGAAATACAATCAAACCAGAACGTTTGAGCTGTTTAAACAACATGAGATCACTTGTTTTAACATATagacagatactgtatatactgtagacaTGCTA

Function

GO: NA

KEGG:

id description
K19882 NOTUM; O-palmitoleoyl-L-serine hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7035 lncRNA downstream 13151 16967909 ~ 16972243 (-) True G5202
XR_005640647.1 lncRNA downstream 64668 16917074 ~ 16920726 (-) True LOC120568012
TU6929 lncRNA downstream 142391 16788545 ~ 16843003 (-) False G5140
TU6930 lncRNA downstream 192545 16762368 ~ 16792849 (-) False G5140
TU7080 lncRNA upstream 56008 17051628 ~ 17051857 (-) True G5242
TU7101 lncRNA upstream 64541 17060161 ~ 17060543 (-) True G5261
TU7104 lncRNA upstream 66290 17061910 ~ 17062119 (-) True G5264
TU7105 lncRNA upstream 67448 17063068 ~ 17065526 (-) True G5265
TU7107 lncRNA upstream 74557 17070177 ~ 17071728 (-) True G5267
XM_039805535.1 mRNA downstream 19169 16957612 ~ 16966225 (-) True tmc8
XM_039795714.1 mRNA downstream 28062 16946866 ~ 16957332 (-) True LOC120556225
XM_039815158.1 mRNA downstream 39532 16936801 ~ 16945862 (-) True syngr2b
XM_039815126.1 mRNA downstream 64341 16907096 ~ 16921053 (-) True afmid
XM_039795539.1 mRNA upstream 157302 17152922 ~ 17154504 (-) True npb
XM_039795568.1 mRNA upstream 160111 17155731 ~ 17161156 (-) True sgsh
XM_039801873.1 mRNA upstream 250929 17246549 ~ 17256447 (-) False LOC120559819
XM_039801851.1 mRNA upstream 250929 17246549 ~ 17256447 (-) False LOC120559819
XM_039801889.1 mRNA upstream 250929 17246549 ~ 17256284 (-) False LOC120559819
TU6856 other downstream 637472 16345770 ~ 16347922 (-) True LOC120558720
TU6504 other downstream 1555838 15426544 ~ 15429556 (-) False sdk1a
TU6236 other downstream 2081185 14901150 ~ 14904209 (-) False ubl5
TU6167 other downstream 2266292 14712203 ~ 14719102 (-) True LOC120555938
TU5715 other downstream 3418128 13531753 ~ 13567266 (-) True G4168
TU7590 other upstream 715026 17710646 ~ 17713898 (-) True LOC120560175
TU7616 other upstream 835072 17830692 ~ 17835761 (-) False epn3b
TU7631 other upstream 848316 17843936 ~ 17845404 (-) False LOC120556682
TU7664 other upstream 884248 17879868 ~ 17881759 (-) True LOC120556582
TU8084 other upstream 1889348 18884968 ~ 18890220 (-) True G5930

Expression Profile