Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039805276.1 |
| length | 1257 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 9 |
| gene id | rnaseh2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053112.1 |
| NCBI id | CM020909.1 |
| chromosome length | 48724115 |
| location | 24373364 ~ 24376889 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | biological_process |
| GO:0004523 | RNA-DNA hybrid ribonuclease activity | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K10743 | RNASEH2A; ribonuclease H2 subunit A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640574.1 | lncRNA | downstream | 274271 | 24096692 ~ 24099093 (-) | True | LOC120567450 |
| TU9804 | lncRNA | downstream | 289088 | 24082513 ~ 24084276 (-) | True | G7179 |
| XR_005638833.1 | lncRNA | downstream | 313520 | 24056501 ~ 24059844 (-) | True | LOC120556287 |
| TU9760 | lncRNA | downstream | 317604 | 24015459 ~ 24055760 (-) | False | G7141 |
| TU9951 | lncRNA | upstream | 68291 | 24445180 ~ 24449314 (-) | True | G7292 |
| TU9993 | lncRNA | upstream | 159491 | 24536380 ~ 24539504 (-) | True | G7324 |
| TU9994 | lncRNA | upstream | 163075 | 24539964 ~ 24541406 (-) | True | G7325 |
| TU10016 | lncRNA | upstream | 180589 | 24557478 ~ 24557697 (-) | True | G7343 |
| TU10023 | lncRNA | upstream | 209137 | 24586026 ~ 24586319 (-) | True | G7348 |
| XM_039805180.1 | mRNA | downstream | 11861 | 24286462 ~ 24361503 (-) | False | LOC120561855 |
| XM_039805171.1 | mRNA | downstream | 11861 | 24286462 ~ 24361503 (-) | True | LOC120561855 |
| XM_039805186.1 | mRNA | downstream | 30458 | 24286462 ~ 24342906 (-) | False | LOC120561855 |
| XM_039805162.1 | mRNA | downstream | 46088 | 24286462 ~ 24327276 (-) | False | LOC120561855 |
| XM_039805258.1 | mRNA | downstream | 87575 | 24275916 ~ 24285789 (-) | True | atg4da |
| XM_039805245.1 | mRNA | upstream | 2231 | 24379120 ~ 24383311 (-) | True | LOC120561906 |
| XM_039817000.1 | mRNA | upstream | 21585 | 24398474 ~ 24409128 (-) | True | LOC120569117 |
| XM_039812086.1 | mRNA | upstream | 59038 | 24435927 ~ 24437423 (-) | True | smdt1b |
| XM_039816669.1 | mRNA | upstream | 81289 | 24458178 ~ 24460081 (-) | True | mb |
| XM_039816741.1 | mRNA | upstream | 81289 | 24458178 ~ 24460048 (-) | False | mb |
| TU9657 | other | downstream | 562400 | 23774725 ~ 23810964 (-) | False | palm3 |
| TU9658 | other | downstream | 593040 | 23774725 ~ 23780324 (-) | False | palm3 |
| TU9637 | other | downstream | 604523 | 23752026 ~ 23768841 (-) | True | G7071 |
| XR_005638947.1 | other | downstream | 659278 | 23711827 ~ 23714086 (-) | False | LOC120557242 |
| TU9627 | other | downstream | 800315 | 23572705 ~ 23573049 (-) | True | G7065 |
| TU9991 | other | upstream | 155347 | 24532236 ~ 24535316 (-) | True | G7323 |
| TU10046 | other | upstream | 379043 | 24755932 ~ 24759600 (-) | True | LOC120543531 |
| TU10312 | other | upstream | 1321372 | 25698261 ~ 25699557 (-) | True | G7589 |
| TU10328 | other | upstream | 1407055 | 25783944 ~ 25788229 (-) | True | G7603 |
| TU10486 | other | upstream | 1624635 | 26001524 ~ 26003263 (-) | True | G7722 |
