RNA id: XM_039808097.1


Basic Information

Item Value
RNA id XM_039808097.1
length 6521
RNA type mRNA
GC content 0.55
exon number 27
gene id kif16ba
representative False

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5813365 ~ 5874875 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agctaacaggctaacagACTCCTGACAGTGGCCATGGAGGTGAGCCGGTTTACACCGGGACGGCGACACTCTGTCCCCAGACAACGATAACAACTGTCTACGGCGGCgaccctcttctcctcctcgcTATATGCCTACTTTGTGTTTAAGTCCGTCGGGTTATCTTGGTCGACTTTTGCCCTCTTTATCCCCGCAGCGCCTACATGCTAACTAGCTAGCCTTGTTAGCTAGCTATAAATCAGCGTCGCTCAAAACTAAAAAGCTAACAAACTAACCGGGGGACTGGACGGACGGACATGTGCAATGGCATCGGTTCGGGTGGCTGTCCGGGTCAGACCCATGAACAGACGGGAGAAGGACTTGACTGCAAAATGCATCATCAAGATGGAAGGGACGAAAACCTCCATCATCAACCTGAAGACCCCCGAAGGCATCGCAGGTGACCTGACGAGAGAGCGAACCAAGACCTTTACGTACGACTTCTCCTACGACTCCACGGACTGCAAGAGCTCCACGTACGTCTCCCAGGAAAAGgtTTTTAAAGATTTGGGCGTGGATGTGCTGAAGGCGGCGTTTGAGGGTTACAACGCCTGCGTCTTCGCCTACGGTCAGACCGGCTCTGGGAAGTCCTACACCATGATGGGGAATCCAggagATGCCGGTCTGATCCCGAGGTTCTGTGAAAGTTTGTTCAGTCGTATCTCGGCGGCGAGTCGATGGGATGAAGCGTCGTTCCGTACAGAAGTCAGCTACCTGGAGATCTACAACGAGAGGGTGAGAGACCTGCTGAGGAGGAAATCCACTCAGACCTACAACCTGAGAGTCAGGGAGCACCCAAAGGACGGACCGTACGTAGAAGATCTGTCCAAACAcctggtgcagaactacagcgaCGTGGAAGAGCTGATGGAGGCGGGAAACATCAACCGCACCACCGCCAGCACCGGCATGAACGACGTCAGCAGCCGCTCGCACGCCATCTTCACCATCAACTTCACCCAGGCCAAGTTCGACGCAGAGATGCCCAGCGAGACGCTCAGTAAGATCCACCTGGTGGATCTGGCCGGCAGCGAGCGGGCCGACGCCACCGGAGCGACCGGCGTCCGCCtgaaggagggagggaacaTCAACAAGTCGCTGGTCACCCTGGGCAACGTCATCTCCGCACTCGCTGACATGACGCAGGACGGCGTGAACACCAACCTGAAGAAGAAGTCGGTGTTTGTTCCCTACAGAGACTCGGTGCTGACGTGGCTGCTCAAAGACAGCCTGGGCGGCAACTCCAAGACCATCATGATCGCCACCGTTTCCCCCGCCGATGTGAACTACGGCGAGACGCTCAGCACTCTGCGCTACGCTAACCGAGCCAAGAACATCATCAACAAACCCACCATCAACGAGGACTGCAACGTCCGGCTGATCAGAGAACTGAGGGCCGAAATCGCCCGGCTCAAAGCTCTGCTGATTCAGGGCAACCAGatTGCTCTCCTGGACTCGCCCACTGCTCTGAGTATGGAGGAGAAACTGCACCAAAATGAAGCCAGAgtcCTGGAGCTGACTAAAGAGTGGACCAACAAATGGAACGAGACTCAGAACATTCTCAAGGAGGAGACTCTGGCTCTGAGGAAAGAGGGGATCGGCGTGGTGTTGGACTCGGAGCTGCCGCACCTCATCGGCATCGACGACGACCTGCTCAGTACCGGCATCATCCTGTACCATCTGAAGGAGGGACGGACATACGTGGGAAGGGAGGACGCGTCAACAGAGCAGGACATCATCCTGCACGGTCTGGACCTGGAGAGCGAACACTGCATGTTTGAGAGCCAGAACGGCAAAGTGACTCTGGTGCCGCTCGGCAGAGCCCAGTGTTCAGTTAATGGAGTTCAGGTGACGGAGCCGATGCCGCTCAACCAAGGTGCTGTTATTCTGCTCGGCAGGACCAACATGTTTCGCTTCAACCATCCGAAAGAGGCGGCCAAGCTGAGGGAGAAACGCAAGAGTGGCCTGCTCTCTACGTTCAGCCTCTCTATGACCGATCTGTCCAAGTCCTGTGAGAGCCTGTCCACTGTGATGCTCTACAACCCCGGGCTGGAGTTTGAGAGACAGCAGCGAGAAGAGCTGGAGAAACTGGAGCTGAAAAGGAGGCTGATAAACGAGATGGAGGCGAAGCACCAGAGCGAGAAGGCGGAGCTGGAGCGCCTGCAGCAGGAGGTGGAGAGTCAGCGCAAGGAGTCGGAGGAGGTGCAGCAGAGGATCCTCCATCAGGAGGAGAGCCTGCGGCGCCGCAGCCAGGACATCGAGAGCCGCCTGCGAGACTTCCTGGCCGAGAAGGAGCGCTTCGAGGAGGAGAGGCGCTCGGAGATCCACGGCGAGGAAATCCAGCGGCAGAAACGGGAGCGGGAAGGCGAAGCCGAAGAGAAGGAGCAGGACGCGGAGCAGCGGCGGCAGCAGGAGGCCGCGGAGCAGACGGAGATCTACCGCGAGCTGGAGCGGCTGAAGAGGGAGCGCGAGGAGCAGAGGGTCCGTCTGGAGGCGGAGCGCCGGCGGCTGGAGGAGCAGGAGCGCGAGCAGCTGAGCCTGGTGGGCCGGCTGGAGGAGCAGCTGAGGGAGAAACACGAAGCGGCCTCCGCCCTGCTGACCCTGGAGGACGCGCGGCGCCTGGAGGAGGAGCGGCGAGCCCTGGCCGAGATCAGGGAAGCGCTCCTGCGCGCCAAAGAGACCGCGGAGCGACCGGACGTGGAGGAAGCCGGCGAGGAGGCGCGCTCCGCCCAGCTGCGATACGCGAACTTCAAGCAGGCGCAGGTGAAGGAGCTCGGCGAGCTGGAGGAGGGGCTGCGGCACCAGAGGGAGCGTCTGGAGAAAGAGGTCGCGGCCGAGCGTAGCGCTCTGCTGCACCTCACGCACGGGCTCAAAGAGAGACACCAGCAGCTGAAGGAGACGCAGACAAAGGGGGCACAGGACGCCAGCGCCGTCTGCCAGGAGGAGCAGCTGGTCAAACAGGCGGAGCACAGGCTGCAGCTCAAGGAGCGCCAGCTGGCCAGCGTGGCCGAAGTCCTCCTTCCCACGCTGGCCGAGGAGAAGCAGAGAGCCGCGGAGGTGCTGGAGCGCAGCGGGGGCGACAGCAGCAGCAACGGGAACTGCGTTGGCCCCCCGGGGCTGGACAACACGCTGTTCCAGGTGGAGAAGGAGCTGGAGGACAAGGAGGAGAAGCTGAGCCTCCACCGGCTCGGCgctcagcagctgcagcagctccaggaGACCTACGAGTTCACGGCCAACGTGGCGCGGCAGGAGGAGAAGGTGcggaggaaggagaaggagatcCTGGAGTCCAAGGAGAAGCAGCAGAGGGAGGCCATGGAGCAGGCCGTGGCCCGGCTGGAGAGGAGGCACTCGGCCCTGAGGCGCAGCGTCTCCCTGGAGCCCGACACCGAAGAGCAGAGACACAAGAGCTCTGCCGTCAGGAACCTGAGGACCGGGGGAGACCTGGACCAGCAGAGAGTTGAGCGGGAGATCCAGAAGCTGAGACGAAGGATCAGCGAAGGGGAAGAGAACAACAGGACTCACTCCGTCAATAACGAGGAGAAGACGAGTCACAACAGCTCTCCGGTCAGCCACATCCAGAGTCTGAACCCTCTGCTGCCGCTGTCTGACGACAGGATAAATGCGTACATCGAAGAGGAAGTCCAGCGACGCTTACGCAAGATGAATCTTCTcaacggcagcagcagcaacatggatctgtctctgtcctctgaATCTCTCAGGGACGAGGAAGAAGCTAGTGACTGTAGCTCTGTTAGATTAACGGACGAGGATGATGAAAAGCTGCAAAACATTAATCCAAGGAAGCTTAAATATGAGAAAGCCTGCGGGTTGGAGTCTAGCTTCCTGCCTTCCCTGGAGCTCAAGGCAAACTCCCCGCCTCACATCCAGGAAAACATGTTCGAAGAACCACAGAACGGCATCTTAAAACTTCACAGAGAAGACAAACTTGAATCCACAGCTAATGTCTTGGTTGAAACGAAGGAAGTGCATTACAGAGATGGCGAAAAAATCAAATTGTGGCAAGAAGAAGCGAGTATCCCTCTAGGAAGAGTGGGCCGAATTGTTGGTGAAATTGAACGTTGCACCATTGGACAGCCTAAGTTTTGTGTAAGCCCGGCAAACACAGAAACCAAGGGAGTTGATGAAAATGAGAACATCACTGAAAAAAGAATAAACGATTCTGGCTTCTGTGTTCCTGATGATGATGAAGTGATTACAGATCAAACGACAGAGCTGCCGGTAAATGGACACTCTTCTTACTCAAAGGAGAAAGTCGAGCACCAAACATGTGACCCAGGGTTGGCGCAAGATGTAGAAGTTCCCAATGATCAGTCATCAAAGTTGCAGAACTTTGTCAATGACGTTGGTGATTCCAAGGAGGAGTCGAAGGAATCGGTTAGTGGTCAAATAGAGCAAGACACAGACCCAGAAACTGAGCAAGTGGCGGCCAAAAGAAGCTGTTCCAAGGAGGAGTCGAAGGAATCGGTTAGTGGTCAAATAGAGCAAGACACAGACCCAGAAACTGAGCAAGTGGCGGCCAAAAGAAGCCGTTCCAAGCAGGACTCGAAGGAATCGGTTAGTGGTCAAATAGAgcaaaagacagacacagaaactgAGAAAGTGGCGGTCAAAGGGAGCTATGTTTTGGGGTATTTTGCTGGCAAGCTGTCGGAAGTGTACAAAGGTGCCGGTAGAAGGCTACAAGGCACACAGGACATAATTCGAAATGTGCGAGCCGGTGAAATAAGGGTTGCGCTCTCTCAGTATGTGACCAAGATCTCTAAAGAGCTGCCACTGATTCATCGAATGCAGCTTACACATGAGCCAGAACCTTGCATCCTTACAGAAAATGAAGTCTGTCAGGTTGATCAGCTGGGGGGTTTCACCCTTATGGCCCCGGGCATCTCAAGATGGCCTGAAGGCTCTGTGTCGTCTCTCAAAGAAGCATGTCCGGAAGTTTTTAATCAGGGGCTGGTCCAGCTGCCGCCAGCCTTGTCTCAGCTACAGTCTCTTTCCTCCCAGAAGATGCTAGAGAAGTTGGGATCTGTGGCTCCTCAGATGGAAGTCGATGAGATTTTGAGTATCTTCTGGCTCGAAACTGCCAACCGTAAGCAGCCAATTCCTAAGCCTGGGTGCCTGCTTTTGTCAGGAAAGGACATAACAGTGCTGTCAACAAGCGAAACCAATTCAGAAGACACCATAGCTATTTCTCACCACTTGAATCTCCGTGAAATCAAGGAGGTCCAGATTAGTTTGGCCGGGCAGCACGTTCGCCTAATTGGCTGCACGGAAGACACTGTTTTGGTAGTCTTTACCCACAGCAAAGATCTTACCCAGGAGTTCTGCAAGTCTTTACTCAAGGTCCTTTCTCCAGAAAAGTTCTCTGAAGGGACTGAAGATCACCCGTTACTCTCCGACGACCTAATGGTCCTCTCGTTGGATTGGACGTTGAGCGTTCCTGACCTCGTCCTGGCCAACGGCGTTCACGTCACCTCCAGATTCAAGCGTGTCCTCGCAGACCTGCTCTACATCGTCCACGGTAACATGGACGATCCCGGCAAACCTTCTCTGGCACACGTTCGCCCTCTGCTCTACACCAGCGTCGAGATCAAGAACTCTACTGACACCGCGCCAGGACAGGACGCCATTTTCCAGTTCCTGTTGACGGACACTCACGTGGCTCTTCTCCGAGAGGACGGAGTCTTTCACCCGGTGCCGCGCGGCTCCAGTCTGGTCCCTGCCCAGCCCCAGTTTCAGGCACTCAAACTCCGCAAGCATTCGGACATCCGATGCGTGCTCGTGAGGGAGAGCGACAACTGCCTGGTGCTCGAGCTTATGTTTACAACTCACAGATCACAAACTCGAGGGAAGAAGGTGGCGTCCAGGCTTGAATCGGAGTTGCCCGCCACCTGTGATTCCAGTGATTCCAGTTATCTGTGCGATTCCTGGAAGTTATCTTTTGGTTGTACTTCAGAAGCTGTAATCTTAGTCAATCATCTGTGTGGCTGAGTCAAAACACCTGAACGCATTTCCACCTTGATTCATTCACAAATGCAGAAATTATCAGGCGGGCGCCTTATTTGTTTAAGGACGTGTTGAATGAGTTTTTGCCATTTGACGAAGAAAATATCTTTTAGAGATATTGTCTAAAGATCCTAAAAGCGGTTTCACTTTGAGCCATTCACATATGCAGCGTCTTGACTTGTGTCCGAAAGAAAGTAGGAAAGAAAGGGAAGAAGGAATttcaaaaagagagaaattatCAGGCGGCCGCCTTATTTGTTTTAGGATGCATTAAATAGGTTTCTGCCATTTGATGGAGAAAAATAGGAGTTCAGAGATGGTGTCTGAAAATGTGATTAATCATTCTGCgaagtaaaaaatatttttaaaatatttttggtaaccatttactttaagttttctacataagagtgacatgacactgtcatgaatacatgaaccctaaccat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2953 lncRNA downstream 13787 5802850 ~ 5807849 (-) True G2105
XR_005640047.1 lncRNA downstream 25880 5793615 ~ 5795756 (-) False LOC120563981
TU2971 lncRNA upstream 7042 5881917 ~ 6023413 (-) True G2122
TU2975 lncRNA upstream 36303 5911178 ~ 5912263 (-) True G2126
TU2990 lncRNA upstream 187345 6062220 ~ 6063639 (-) True G2137
TU2995 lncRNA upstream 205780 6080655 ~ 6081592 (-) True G2142
TU3002 lncRNA upstream 241622 6116497 ~ 6158715 (-) True G2147
XM_039808067.1 mRNA downstream 84650 5731439 ~ 5736986 (-) False LOC120563692
XM_039808051.1 mRNA downstream 84650 5731439 ~ 5736986 (-) True LOC120563692
XM_039808060.1 mRNA downstream 84817 5731439 ~ 5736819 (-) False LOC120563692
XM_039808022.1 mRNA downstream 321643 5476545 ~ 5499993 (-) True LOC120563672
XM_039807973.1 mRNA downstream 349631 5471446 ~ 5472005 (-) True LOC120563643
XM_039808219.1 mRNA upstream 12594 5887469 ~ 5892793 (-) True LOC120563808
XM_039809799.1 mRNA upstream 24681 5899556 ~ 5905631 (-) True LOC120564640
XM_039808209.1 mRNA upstream 64971 5939846 ~ 5944002 (-) True LOC120563798
XM_039808437.1 mRNA upstream 84452 5959327 ~ 5964163 (-) True LOC120563920
XM_039808260.1 mRNA upstream 95065 5969940 ~ 5972824 (-) True LOC120563835
TU2877 other downstream 321698 5496038 ~ 5499938 (-) False LOC120563672
TU2878 other downstream 321698 5496038 ~ 5499938 (-) False LOC120563672
TU2879 other downstream 321698 5496038 ~ 5499938 (-) False LOC120563672
TU2814 other downstream 516471 5288076 ~ 5305165 (-) False G2010
TU3000 other upstream 236264 6111139 ~ 6111592 (-) True G2146
TU2942 other upstream 327451 6202326 ~ 6206890 (-) False LOC120563747
TU3049 other upstream 391731 6266606 ~ 6267238 (-) True G2177
TU3116 other upstream 646631 6521506 ~ 6534312 (-) True G2219
TU3119 other upstream 646631 6521506 ~ 6534312 (-) False G2219

Expression Profile