RNA id: XM_039811894.1


Basic Information

Item Value
RNA id XM_039811894.1
length 2294
RNA type mRNA
GC content 0.46
exon number 5
gene id zglp1
representative False

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24137388 ~ 24145207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGTTTGCAGCAGCTACCAAGTGAAACTGGAACTCGGTGTGGCCAACGCTTTTATTCCCCAGCAGGTGTAATCAAGCGAACCAAAACACCCGCGTAATTCCTCTTGGTCCAAAACACGACCCAGTCATAGCAACCAGCTCCAGCAATTGGAGTTCCCAACATTTCCTCAACATGAGCACAGGACCAAGGACACAAGCTGCCTTCATCCAGGGAAACCAGAGCACAATTGAACATGATGCCTCCCACTCAACACTCTTTTACCTTTTCCAAGAAGTTTCCAAGCTAGCATCCCCTATCCACAACAGTTTCCTGGACACAAATTCACCCTCCATGTGTATACATGAGCCTTCTAGGCAAGGTCCTTTTATGGttaaaaaagaggaagaggatgcACATCCGTTTCAAATCTCTAATAGTTCCTGCCAGTGCAGTTTGTCTCGTATGTCACCTTATAATCCAACGAAAAAAGTGAAGGAGGAAAGTCACAACAGCAAGGTCACAACTTTGGTTGAGCCACATCCTCAATGCAACAGCCCCTGGAAAGTACTAAGTCTGATCAATCTGCAGTGTGAGAGGCTCCTGTATCAAAGGGATGTGGAGGCGTCAGACCCAAGTTCAGTATCATCTACCACAAAATTGGGCCATTCAATAGACAAATCATCGACTGCAACAGCAGATGTAACAGATCAGGGAGTCGGAGGTGACCGTGTAAATGTTGAATGCACATTGAGACCATCTGTTCTTATCTATGAGAGGCAAGAAATCCCAGCCAGTGTCAGTCTTGTGGACGATGTGAGAGAggactgcagcagagaagccAGAAGTTATAAACCACAGTGCTGTGTGAAAGACTCCAAGGTGGGCTGTTATGTTCAGTCGCAGACTGCTGAAAAAGCAGACACTGTTTCAGTGTTCAGTGTTCACAGACAATTTGAGTGTAACCAGGAGTGTGAGAAGcattgtttttcttctgaacatattttgcatttacccttctctgaaaatgttttgtctCCAACTCACATGCCTGATGCATTCCTTAATGCCCAGTTGACTTTTAATTCAAGTGAAGATGCAAGTGTAGCTCTGTCAAAGCCAGCACTAACACTAGACCACAATGCAAACCTTGCTTTGACTACAGAGCCCCCATGTGACTCCCAGCTGCCCCATCCAAGCTCCGTCATGCCTTCTTCGCAATCTGCATCACTTTTATCTAGCACGACAGAGAATTGTCACCTACTTTCAAAACAAGATGACAAAATCACAGCATCTAACCCAGAATGTACTGATGCTCACATAAAGGAGAAATGCCCTCTGGTTGCACAACTGAAATCCTCAAGCTATAATGGAGAAACAAACCCATTACCTTCTGCAACATCAAAACCAGAACCCAGGTCAGTGCAAAAGGAGGAACTTGCTGCTCCATCTACCCAACAGTCAAGAACCAAGACTCCTAGAAAACAACCTCATCCCAGCCGGAGTGCTAATATCCAAGACCCAGACTTCCAGGGAGTGACGTTCAGGATGGAGACAGAGCTGGATGACAATAGGGGACAGTGTCGGCTACTCATAACTTCAAAGTACAGCAAGGAGCTCCGCAAGAGTGTGAGAAAACCAAGGCTGAGGACACGGACGTCTCAGAAATCCCTTAAAACTAGCAGCTCGGATGAGGAGAGTTCCCCGACGACCAGTGTTTCCAATGGTAAAGCCTGTGCATCATGCAGCACCAGGAAGACCCCCATGTGGAGGGATGCAGAGGACGGGACCCCCCTCTGTAATGCCTGTGGAATAAGGTATAAGAAGTACAGAGTGCGCTGTGTCAACTGCTGGCATATCCCTAGGAAAGAGGGCAACTCCAACTCATGCTGCCTCAAGTGTGGAAACTTTGTGAGGCTGACCTCATCTCAGCGGAAACACACCACCTAGCAAGACAAAGAGCAAAGGTTTTTATGTCCGTGTGTGACGAAGGTCTACACACATTTGCACAACAACAGTTCAAAACTACTCTCTGCTCCCGTAGTTCATAGTCTGCTACAGTTCACTACAGATGGAAATGCAAACGTAGAGGAGCAGCACCAGCTTCTTACATCTTACTTGACTCGGTAATTAGTTTGACTGCAACAATGATGTACCTCAGGGAAGACCAATTCCCTTTGGGTCCCTTTCTGCTCTCAAGGTGCTGTATACAccagggaaaaaaacataaacatgtaaacaacctaaaatgaaaaaaaaaccttgttaaactctttttaaaaatgaaagggTATCTGAATAAAACAATATGTACTTCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640574.1 lncRNA downstream 38295 24096692 ~ 24099093 (-) True LOC120567450
TU9804 lncRNA downstream 53112 24082513 ~ 24084276 (-) True G7179
XR_005638833.1 lncRNA downstream 77544 24056501 ~ 24059844 (-) True LOC120556287
TU9760 lncRNA downstream 81628 24015459 ~ 24055760 (-) False G7141
TU9951 lncRNA upstream 299973 24445180 ~ 24449314 (-) True G7292
TU9993 lncRNA upstream 391173 24536380 ~ 24539504 (-) True G7324
TU9994 lncRNA upstream 394757 24539964 ~ 24541406 (-) True G7325
TU10016 lncRNA upstream 412271 24557478 ~ 24557697 (-) True G7343
TU10023 lncRNA upstream 440819 24586026 ~ 24586319 (-) True G7348
XM_039817383.1 mRNA downstream 1719 24133897 ~ 24135669 (-) True LOC120569492
XM_039814416.1 mRNA downstream 41165 24091667 ~ 24096223 (-) False lyl1
XM_039814409.1 mRNA downstream 41165 24091667 ~ 24096223 (-) True lyl1
XM_039795744.1 mRNA downstream 68560 24066928 ~ 24068828 (-) True LOC120556266
XM_039806733.1 mRNA downstream 251626 23882745 ~ 23885762 (-) True LOC120562828
XM_039811905.1 mRNA upstream 195 24145402 ~ 24149825 (-) True fdx2
XM_039816060.1 mRNA upstream 69486 24214693 ~ 24217245 (-) False cdkn2d
XM_039816054.1 mRNA upstream 69486 24214693 ~ 24217245 (-) True cdkn2d
XM_039816049.1 mRNA upstream 72161 24217368 ~ 24223061 (-) True ap1m2
XM_039809453.1 mRNA upstream 82213 24227420 ~ 24241325 (-) False ldlrb
TU9657 other downstream 326424 23774725 ~ 23810964 (-) False palm3
TU9658 other downstream 357064 23774725 ~ 23780324 (-) False palm3
TU9637 other downstream 368547 23752026 ~ 23768841 (-) True G7071
XR_005638947.1 other downstream 423302 23711827 ~ 23714086 (-) False LOC120557242
TU9627 other downstream 564339 23572705 ~ 23573049 (-) True G7065
TU9991 other upstream 387029 24532236 ~ 24535316 (-) True G7323
TU10046 other upstream 610725 24755932 ~ 24759600 (-) True LOC120543531
TU10312 other upstream 1553054 25698261 ~ 25699557 (-) True G7589
TU10328 other upstream 1638737 25783944 ~ 25788229 (-) True G7603
TU10486 other upstream 1856317 26001524 ~ 26003263 (-) True G7722

Expression Profile