RNA id: XM_039813482.1


Basic Information

Item Value
RNA id XM_039813482.1
length 1534
RNA type mRNA
GC content 0.51
exon number 5
gene id tomm20b
representative True

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1451999 ~ 1458867 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTCCTTAAGGGTCCTTCCTGCCCTGAGCCGCTCCGCCAGTCTCCTGACGTAAACCGACCACCGGAgaaaaaacagtaaattaaCCCGAAATCCTCCTCGAACCGACCGGGTACCGGGAGTCATGATCGGCGGGAAGACCAGCGCGCTAGCCGCGGGGGTGTGCGGCGCCCTGCTCGTCGGTTACTGCATCTATTTCGACAAGAAACGACGCAGTGACCCCAACTTCAAGAACAGGCTGCGAGAACgGAGGAGAAAGCAGAAGGTGGCCAAAGAGAGGGCAGGCATGGcaaagCTCCCGGACCTGAAGGACGCCGAGGCGGTCCAGAAGTTCTTCCTGGAGGAGATCCAGCTCGGGGAGGAGCTGCTGGCTCAGGGCGACTACGAGAAAGGCGTGGACCACCTGACCAACGCCATCGCGGTGTGCGGTCAGCCTCAGCAGCTGCTGCAGGTGCTGCAGCAGACTCTGCCTCCGCCCGTCTTCCAGATGCTGCTCACCAAACTGCCCAGCATCagccagCGTATCGTGAGTGCACAGAGTCTGAGCGAGGACGATATAGAATGAGAGGATCGAGAGGAATcgactcctcttcctcctccttccctcgTGTCTCCATGACGACCTGCAAAAACGCCTCGGCCTCCATCGCTCCAGGCCGATGCGCATCACTTCCCACATCAAGGCACCCTAAAGAgaatttagtattttttattcctGGTTTATCCGACAAGTCGGTTTGAtagtttgtggtttttttttttttttttttttttacttaaatgaCCTGTTTTTGGGGTATCATAACAGCCAGAGACATACAAAGAGccccccccctcacacacacacacacacacacacaccccactccCTACGTCATTCGGTACTGGTTGATCACCACAACCAAACCAATCTGCAGAGATCCtaaatgaaaatctgcagaatttagcggactgtttttctgtttgggGCTGGAGATATGTTAACACTAGAGATgtcacaatgacattttttccTTCCCAATagcgattccgatacctgaacttgcgtatcgtcAGATACCGAGTACTGAGCCGATAccagtatgttaaaaaaatacataaacactcacctaaaggattattaggaacaccctactaataccatGTTTGACCCCCGTTCGctcttcagaactgccttaattcttcgtggcattgattcaacaaggtgctggaagcattctttagaaatgatgGCCCATactgagaggatagcatcttgcattTGATGGAGATTTGGGGGATGCAcgtccagggcacgaagctcccgttccaccacatcccagagatgttctattggggtgagatctggtgactgtgggggccattttagtacagggAACTCACTGTCATGTTCAAGAGACCAGTCTGAAATGAttggagctttgtgacatggtgcgttatcctgctggaagtagccatcagaggatgggtccatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaagctgtggcatttaaacg

Function

GO:

id name namespace
GO:0006605 protein targeting biological_process
GO:0005742 mitochondrial outer membrane translocase complex cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17770 TOM20; mitochondrial import receptor subunit TOM20

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU766 lncRNA downstream 66405 1385333 ~ 1385594 (-) True G570
XR_005640489.1 lncRNA downstream 99016 1352254 ~ 1352983 (-) True LOC120566915
TU698 lncRNA downstream 138521 1220503 ~ 1313478 (-) True G513
TU702 lncRNA downstream 144554 889728 ~ 1307445 (-) True G517
TU747 lncRNA downstream 169357 1245373 ~ 1282642 (-) True LOC120566896
TU782 lncRNA upstream 29581 1488448 ~ 1562974 (-) True G581
TU790 lncRNA upstream 51523 1510390 ~ 1521486 (-) True G588
TU795 lncRNA upstream 57259 1516126 ~ 1516675 (-) True G590
TU798 lncRNA upstream 77379 1536246 ~ 1536655 (-) True G591
TU784 lncRNA upstream 89165 1548032 ~ 1575776 (-) True G583
XM_039813410.1 mRNA downstream 874007 572765 ~ 577992 (-) True LOC120566769
XM_039813417.1 mRNA downstream 875428 572764 ~ 576571 (-) False LOC120566769
XM_039812635.1 mRNA downstream 1022015 404857 ~ 429984 (-) False tbce
XM_039812616.1 mRNA downstream 1022015 404857 ~ 429984 (-) False tbce
XM_039812627.1 mRNA downstream 1022026 404857 ~ 429973 (-) True tbce
XM_039803728.1 mRNA upstream 11550 1470417 ~ 1576495 (-) True stab2
XM_039803758.1 mRNA upstream 166663 1625530 ~ 1629159 (-) True LOC120560873
XM_039812876.1 mRNA upstream 286870 1745737 ~ 1749692 (-) True LOC120566421
XM_039812225.1 mRNA upstream 638502 2097369 ~ 2106501 (-) True LOC120566021
XM_039812236.1 mRNA upstream 669706 2128573 ~ 2135521 (-) True LOC120566031
TU761 other downstream 91526 1359664 ~ 1360473 (-) True G565
TU704 other downstream 477172 966236 ~ 974827 (-) True G519
TU705 other downstream 478475 966236 ~ 973524 (-) False G519
TU701 other downstream 565656 885349 ~ 886343 (-) True G516
TU575 other downstream 1012551 438657 ~ 439448 (-) True G413
TU785 other upstream 14889 1473756 ~ 1481903 (-) False stab2
XR_005640399.1 other upstream 274679 1733546 ~ 1749692 (-) False LOC120566421
TU905 other upstream 590202 2049069 ~ 2050384 (-) True G670
TU1327 other upstream 1399629 2858496 ~ 2859302 (-) True G974
TU1366 other upstream 1504873 2963740 ~ 2964320 (-) True G1003

Expression Profile