RNA id: XM_039805743.1


Basic Information

Item Value
RNA id XM_039805743.1
length 6930
RNA type mRNA
GC content 0.54
exon number 45
gene id myh14
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22785578 ~ 22820053 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCAGGAAGTTGCTCTCCTGGACTGAAGCCGTCGCCTTGCCCTCACTGCTCTCTGTTTTATTCTCATCGAGTAGTGTGAGTGCGGTTCCACCGAGAGAGCGGTGCAATGATAAAAGCCGCATATGCGGTAGGCTGCTACACACCTATCAGGCAGGAAAATACCCACAAAACAGCCTCACCCCGGTTCTCCTCGCACCACAGCCTTATCCACGACTCAGAGCGGAACCTGAAGTGCCAGTAGAACCATGTCCAAGCCAACGGGGGGCGGTGTCAACGATGTCACCCGCTTACTGATATCAGGGGCGGCACAGCCAGGGTCTCCCACCTCCAACTCTATGTTCTCCGCCGCCAGCCAGGCCGACTGGGCGGCTAAGAGGCTGGTATGGGTGCCGTCAGAGAAGCATGGCTTTGAGTCGGCCAGTATTCGGGAGGAGCGCGGTGATGAGGTGGAGGTTGAGCTAACAGACAGCCAGAGGAAGGTGACTCTGTCCAGGGAGGAGGTGCAGCGGATGAACCCCCCACGCTTCAGCAAAGTGGAGGACATGGCCGACCTCACCTGTCTCAACGAAGCCTCGGTGCTGCacaacctgagagagagatacTACTCTGGCTTGATCTATACCTATTCAGGGCTGTTCTGTGTGGTGGTGAACCCTTATAAGAACCTGCCCATCTACACAGAGTCCATCGTGGAGATGTATCGGGGCAAAAAACGCCACGAGATGCCCCCACACATCTACGCCATATCAGAGGCCGCCTATCGCAGCATGCTACAAGACAGAGAAGATCAGGCCATCCTCTGCACaggGGAGTCTGGAGCTGGGAAAACGGAGAACACTAAGAAAGTCATCCAGTATTTGGCTCACGTTGCCTCCTCCCATAAGGGCGGCACTCTGGGTAGGAACAAGGAAGCTGTGCAGAGTATGCAATATGGCGAGCTGGAGAGACAGCTGCTGCAGGCCAACCCCATACTGGAGGCCTTCGGCAACGCAAAGACGGTCAAGAACGATAACTCCTCTAGATTTggTAAATTCATCCGCATCAATTTTGATGTGGGGGGGTACATTGTTGGTGCCAACATCGAGACCTACCTCCTTGAAAAGTCCCGGGCCACCCGTCAAGCCAAAGACGAGAGGACTTTCCACATCTTTTACCAGTTGTTGTGTGGCACTTCAGACGAGACAAAAGCGGACCTGCTCTTAGGAACTGCTGATGAGTACCGCTTTCTCAGTGGAGGCTCCATCCCTGTTCCTGGTCAGAGCGATTCAGAGAacttcacccagaccatggacTCCATGGCTATAATGGGCTTCACCCCAGAGGAGTCAATGTCCATGCTTAAGTTGATCTCTGCTGTGCTCCAGTTTGGGAACATCTCCTTCATGAAGGAGAAGAACCAGGACCAGGCCTCCATGCCAGATAACACAGCTGCTCAGAAACTGTGCCATCTGCTGGGCGTCAACGTGCTGGAGTTCACACGGGCCATCCTCACTCCCAGAATCAAAGTGGGTCGAGAGTATGTGCAGAAGGCCCAGACGAAAGAGCAGGCTGACTTTGCTGTAGAGGCCTTGGCGAAGGCCACATATGAGCGTCTGTTCAGATGGCTGGTCCACAGGATCAACAGGGCTCTGGACCGCAGACAGAGACAAGGAGCTTCCTTCATAGGCATTCTTGATATTGCTGGATTTGAGATCTTCCAGCTCAACTCCTTTGAGCAGCTGTGTATCAACTACACCAACgagaagctgcagcagctctTCAACCACACCATGTTCATCTTGGAGCAGGAGGAGTACCAGCGCGAGGGCATTGAATGGAACTTCATCGACTTTGGCCTTGACTTACAGCCCTGCATTGACCTCATCGAGAGACCAGCCCACCCGCCTGGTGTTCTCGCCCTGCTAGATGAAGAGTGCTGGTTTCCGCGGGCGACAGATCGCTCATTTGTGGAGAAGCTGTCTACTGAGCAAGGCAGCCATCCAAAATTCTTCAAACCAAAGCAACCACGTGGAGAAGCTGACTTCTCCATCATTCACTATGCTGGCAAGGTGGACTACAAGGCACATGATTGGTTAGTGAAGAACATGGATCCTCTGAACGACAACGTGGCGTCTCTTCTCCACCAGTCATCTGATCATTTTGTCTCAGAGCTTTGGAAGGAGGATATTCAAACTCTTCCTCGTGTATACTTCTTTGACTCCTATGCCACACTACAGACTAATGGCTCTGACATGGACAGGATCGTGGGTCTGGACCAGGTGTCTTCAGGAGAGAACAGCGGGCCGGTCACGTTCGGAGCGGCAGGGCTGAAGACAAAGAAGGGAATGTTCAGGACTGTTGGTCAGCTTTACAAGGAGTCGCTCACGAAGCTGATGGCCACGCTGAGGAACACAAACCCCAACTTCCTCCGCTGCATCATCCCCAACCACGAGAAGAAGGCTGGTAAGCTGTCCCCCAACCTGGTTTTGGACCAACTGAGGTGTAATGGAGTTCTGGAGGGCATCCGTATCTGCAGACAAGGCTTCCCTAACCGCATCCCATTCCAGGAGTTtagacagagATATGAGATCCTGACTCCGAATGCTATTCCTCGCACCTTTATGGATGGCAAACAGGCATCAGAACTCATGATTAGAGCTTTGGAACTGGATCACAACCTGTTCAGGGTCGGTCAGAGTAAAGTCTTCTTCAGAGCCGGAGTCCTGGGTCAcctggaagaagaaagagacctAAAGATCACGGACACCATCATACGCTTCCAGAGCGCCTCCAGAGGCTACCTTGCACGCAAATCCTTCCTGAAGAAGCAGCAACAGCTGAGTGCTCTGAGGGTGATGCAGAGGAACTGTGCTGCTTACCTCAAACTCAGGAACTGGCAGTGGTGGCGGCTGTTCACCAAGGTGAAGCCCCTGCTGCAGGTTACCCGGCAGGACGAGGAGATCCAGGTAAGGGAAACCGAGCTCCAGAAGGCCAAGGACAATCTCACTCGAGTGGAGCAGGACTACACAGAGCTGGACAAGAAACATGCTCAGCTGATCGAGGAGAAGGCCGTGCTGGCTGACCAGCTGCAGGCAGAGGCGGAGCTGTTTGCTGAGGCAGAGGAGATGAGGGCCCGTTTGGCCAGTCGGAAACAGGAGCTGGAGGAGGTGCTGGGCGAGCTGGAGAGTCgattggaggaagaggaggagagaggcgtGCAGCTGACCAATGAGAAGAAGAGGATGCAGCAGAATGTTCAGGACCTGGAGGAGCAgttagaggaggaggaaagtgCCCGACAGCGCCTCCTGTTGGAGAAGGTTACCTTGGAGACCAAAGTGAAGAGTCTGGAAGCCGACTTGCTGAATGCAGTGGAGCAGAGAGACCGACTCAGCAAGGAGAAGAAACAGCTGGAGGAGCGTCTGGCTGAGGTAACCGATCAGCTcactgaggaagaggagaaaaccAAAAGTCTAAACAAACTCAAGAACAAACAGGAGGCTGTCATCGCTGACCTAGAGGAGCGCTTGAAGCGTGAGGAGCAGGGGCGCTTGGAGCAGgagaagtggaggaggaggatggagaaCGACTCGTTGGAGGCCCAGGAGCAGCTGTCGGACCTGGGAATGCTGTCCGCGGAGTTGAGGGGCAGTCTGGCTCAGAAGGAGAAGGAAATCACCACCCTTCAGGGCCGGTTGGAGGAAGAAGGAGCGCGTCGTGCGGAGGCTCAGAGGGCGCTAAGGGAAGCCATGTCCCAGGTGTCTGAGCTGAAGGAGGAAGTGGAGAATGAACGAGGGATGAGGGAAAGGGCGGAGAAACAGAGGCGAGACCtgggggaggagctggaggCTTTGAGAACTGAGCTGGAGGACACTCTGGACACCACAGCTGCCCAGCAGGAGCTAAGGTCTCGCCGGGAGGCGGAGTTAAATGATCTCCAGCGGTGTGTTGAAGAGGAGACTCGCCGCCACGAGGCCCAGCTATCAGAAGTCCGAGTCAAACACAGCGCTGCCATAGACAGCCTCCAGGAACAGCTGGACAATAGCAAGAGAGCACGTCAGTCCATGGAGAAGGCCAAAGCCatgctggaggaggagaggcagaaTTTGAGCTCTGAGCTCAAGAGCCTCCAAGCGAGCCGCACGGAGAGTGAGAGAGGCCGCAAGAGGGCCGAGGGTCAGCTGCAGGAGCTCGGCGCCCGCCTGGCTcaggctgacagagagagggaggagaaggaagagcGAATGCACAAGCTACAGTGCGAGATTGAGTCTCTCTCCGGCAATTTGTCCTCctctgacaccaaaacacttcGTCTCACTAAAGAGGTCAGCAGCCTGGAGAGCCAGCTGCATGATGCCAAGgAACTGCTGCAGGATGAAACTCGTCAAAAGATGGCTCTGGGCTCGAGGGTGCGAGcgctggaggaggagaagaatggaCTGATGGAAAGacttgaggaggaggaggagagagccaAAGAGTTGACCCGGCAGATTCAGACTCACACCCAGCAGCTGGCAGAGCTTCGCAAGCAGTCAGAGGAGGTGAACACTGCGGTGGAAGCCGGAGAGGAGACGCGCCGGAAACTCCAGAGAGAGCTGGACAGCGTCATCCAGAGGGAGCgacagaaggaggaggagaaggagcgGGTGGAGAGGCAGAGGGAGCGACTAAGGGAGGAGATAGAGGACATGACACTTgccctgcagagagagagacagaactgCACGGCCCTGGAGAAGAGGCAGAAGAAGTTTGACCAGTGTCTGGCCGAGGAAAAGGCGGTGAGCGCTCGGCTGGCAGAGGAAAGGGACAGAGCAGAAGCAGACAGCCGAGAAAAGGACACAAGATATCTGGCACTTTCCCGAGCCCTGCAGgAGGCCCAGGACCAGAGGGAAGAGCTGGAGAGGTCCAACAAGCAGCTCCGTCTGGAAATGGAGCAGCTTGTAAACCAGCAGGACGACGTCGGCAAGAGCGTCCATGAGCTGGAGCGCACTCGCAGGAGCTTAGAAACGGAAGCCCAGAACCTGCGAGTTCAGACgcaggagctggaggaggagctgaACGAGGCGGAGAACTCAAGGCTGAGGCTGGAGGTCACTCTGCAGGCGCTCAAGGCTCAATTTGAGAGGGAGATAAGCAGCAACGAGGAgaagggagaggagaagaggagggcgCTCAGCAAGCAgGTGAGGGAGTTGGAGAtccagctggaggaggagcGGAGTCAGCGGTCTCAGGCTGTGTCGACCAAAAAGCAGCTGGAAGCAGAACTGCAGGAAGCCGAGACCCAGGTGGAGACAGCCGGCCGCGGAAAAGAGGAGACTGTGAAGCAGCTACGGAGGCTGCAGGGTCAAATGAAGGAAGTTCTGCGTGAGCTGGATGAGAGCAAGTTGGCTCGGGAAGAGGTGGTCGCACAGTCGAAAGACAGCGAAAAGAAGATCCAATCTCTGGAAGCAGAAGTCCTTCAGTTAACTGAAGAGCTTTCTGTATCAGAGAGGCAGAGGAGACAGGCTCAGCAGGAGAGAGATGAGATGGCTGATGAGATGGTCAACAGCAGCTCTGGAAAGACCGCACTGTTTGAAGAGAAGCGGAGGTTAGAAGCGCGAGTCAGTcagctggaggaggagctggaggaggagcagaGTAACTCTGAACTGCTAGcggagagacaaagaaagactGCTCTACAGGTTGAGACTCTAACCGTGCAGCTGCAGGGAGAGAGGACTTTGACCCAGAAGGCAGAGGTGGCTCGGGAGCAGCTGGAGAGGCAGAACAAGGAGCTAAAGACCCGACTGGGGGAGATGGAGGGAGCAGTAAGGGGCAAACACAGGCTCAGCGTCGCCGCCCTGGAGGCCAAGATCGATTCGATGGAGGAGCAGCTGGAAcaggagagacaGGAACGAGCCATTGCCAACAAACTGATGCGAAAGACAGAGAAGAAACTGAAGGAGGTGATGATGCAGGCAGACGACGAGAGAAGACACGCAGACCAGTACAGAGAACAGCTGGATAAATCCATGGTCCGACTGAAGCAGCTGAAGAGGCagctggaggaggtggaggaggacaACTCTCGCTCCAACGCCCAGAAGAGGAAGCTGCAGAGAGAGCTGGAGGAGCTCTCCGACAGCAGCCAGAGCATGACACGAGAGATCACCGCTCTCCGCAGCCAGCTCagCATTCCTGAATGGAGACCAGATCAGCGTGCTCCGTTGCCCCTGGCATTGCGTGGACGTAGAGCGCTGGTTGACGACCTCTCGTTGGAGAATTCTGACTCTGAGGAGCCCCCTGCCTCGCCGACCCCCTCCTCTGGACTCCCAGGGACCCCGACTCCCTCCTCTGAACATAGCCTGGACCCTCCGCCGCCCTACAGCGTCAACAATACAGAGTGACGCAGACATAGactcagttacacacacacacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatcagccacTCACAGCCTTGACTGCTCAGAGGTGAAGGAGTGACATGCACACAGCACATGACAACACTGTACtttataaaagtaaaaatttAAGATGAATGCATCAGGCGCTACAACTGTAAAACAACCTCACtgaaaagtttgattttacaAAGAGTCAACTggaattcatttttattttgtaacaaactgtgacataaaaaaaacgACATGACAAAGACTGGAAATTTCTACATTACATCTCTGTAAGGCACTTCTGAAAAACTGAACGACATTTCCCAGAGTTCCGAGGGGAAATTGAATTATTATCAACTAATTTCACGAAGCTGTACAGTAATTAGAGGGCAGAAAACTTTATGGTTGTCACGTCTTTTACATTAGGAGGTATTTAAAAACTAAGCCATGTTGTGAACCCTTTGATgaggatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100074 lncRNA upstream 80277 22704872 ~ 22705303 (+) False LOC120562539
TU100051 lncRNA upstream 159627 22623215 ~ 22625953 (+) True arnt
TU99986 lncRNA upstream 473065 22264939 ~ 22312515 (+) False rusc1
TU99992 lncRNA upstream 530102 22255271 ~ 22255478 (+) True G74769
TU99984 lncRNA upstream 539817 22245489 ~ 22245763 (+) True G74765
TU100374 lncRNA downstream 101789 22918752 ~ 22920103 (+) True G75042
TU100379 lncRNA downstream 107629 22924592 ~ 22925155 (+) True G75045
TU100406 lncRNA downstream 165929 22982892 ~ 22987322 (+) True G75065
TU100410 lncRNA downstream 177457 22994420 ~ 22994706 (+) True G75069
TU100419 lncRNA downstream 199844 23016807 ~ 23018595 (+) True G75077
XM_039806276.1 mRNA upstream 1161 22767127 ~ 22784419 (+) False kcnj14
XM_039806277.1 mRNA upstream 1161 22767127 ~ 22784419 (+) True kcnj14
XM_039806279.1 mRNA upstream 1161 22767127 ~ 22784419 (+) False kcnj14
XM_039806273.1 mRNA upstream 44870 22733327 ~ 22740710 (+) True LOC120562542
XM_039806269.1 mRNA upstream 53139 22726212 ~ 22732441 (+) False zbtb7b
XM_039806580.1 mRNA downstream 10844 22827807 ~ 22830355 (+) True si:ch211-120k19.1
XM_039807061.1 mRNA downstream 15393 22832356 ~ 22837799 (+) True rpl18
XM_039805856.1 mRNA downstream 21442 22838405 ~ 22849527 (+) True sphk2
XM_039806496.1 mRNA downstream 35395 22852358 ~ 22864843 (+) True cyth2
XM_039806043.1 mRNA downstream 61068 22878031 ~ 22887878 (+) True zgc:158689
TU100065 other upstream 118036 22660479 ~ 22667544 (+) False LOC120562537
TU100045 other upstream 162496 22616972 ~ 22623084 (+) False arnt
TU100052 other upstream 162496 22616972 ~ 22623084 (+) False arnt
XR_005639804.1 other upstream 200008 22559945 ~ 22585572 (+) True celf3b
XR_005639856.1 other upstream 296862 22469978 ~ 22488718 (+) False rprd2b
TU100365 other downstream 83181 22900144 ~ 22902048 (+) False cnot3a
TU100710 other downstream 674162 23491125 ~ 23494023 (+) True LOC120562612
XR_005639923.1 other downstream 947352 23764315 ~ 23764645 (+) True LOC120563205
XR_005639924.1 other downstream 950222 23767185 ~ 23767467 (+) True LOC120563206
XR_005639922.1 other downstream 951270 23768233 ~ 23768577 (+) False LOC120563204

Expression Profile