RNA id: TU102290


Basic Information

Item Value
RNA id TU102290
length 200
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G76467
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 27803762 ~ 27803961 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCTGAACAAAGACAGTGAAGAAGATAACGGTGATGATGGCAGTAAGGAACATCTCTCTCATGGGAAATTCCTCTTTTTTCAGCAGGAAGCCAAGGGAGAAGGCGATGGCACCTCGCATGCCACCATAGGCCACAATGAACTGGTCCTTGGTCGTCAGTTTGACGATGCGGAATTTGTTGATCACACAGGTCAGACCAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102289 lncRNA upstream 8889 27794552 ~ 27794873 (+) True G76466
TU102288 lncRNA upstream 10551 27792772 ~ 27793211 (+) True G76465
TU102287 lncRNA upstream 13358 27785195 ~ 27790404 (+) True G76464
TU102268 lncRNA upstream 238431 27555844 ~ 27565331 (+) True G76445
TU102274 lncRNA upstream 282249 27520692 ~ 27521513 (+) True G76451
TU102291 lncRNA downstream 1657 27805618 ~ 27805835 (+) True G76468
TU102293 lncRNA downstream 5837 27809798 ~ 27810042 (+) True G76470
TU102339 lncRNA downstream 59488 27863449 ~ 27863735 (+) True G76503
TU102340 lncRNA downstream 80416 27884377 ~ 27885409 (+) False fam110d
TU102347 lncRNA downstream 130834 27934795 ~ 27938662 (+) True G76510
XM_039805412.1 mRNA upstream 447929 27351851 ~ 27355833 (+) True pnrc2
XM_039804702.1 mRNA upstream 498756 27303310 ~ 27305006 (+) True LOC120561567
XM_039804667.1 mRNA upstream 788660 27013093 ~ 27015102 (+) True utp11
XM_039807189.1 mRNA upstream 848478 26943236 ~ 26955284 (+) True rspo1
XM_039805832.1 mRNA upstream 913927 26886568 ~ 26889835 (+) True dnali1
XM_039807243.1 mRNA downstream 63483 27867444 ~ 27885464 (+) True fam110d
XM_039804991.1 mRNA downstream 158729 27962690 ~ 27983714 (+) True ago1
XM_039804992.1 mRNA downstream 158737 27962698 ~ 27983714 (+) False ago1
XM_039804993.1 mRNA downstream 180092 27984053 ~ 28027526 (+) True LOC120561771
XM_039806614.1 mRNA downstream 243682 28047643 ~ 28059160 (+) True si:dkeyp-97a10.3
TU102237 other upstream 515305 27284538 ~ 27288457 (+) True G76417
TU102152 other upstream 917216 26883450 ~ 26886546 (+) True G76355
TU102095 other upstream 988371 26808118 ~ 26815391 (+) True G76315
TU101929 other upstream 1661135 26139901 ~ 26142627 (+) True G76192
TU101746 other upstream 2299710 25502600 ~ 25504052 (+) True apoc2
TU102349 other downstream 144922 27948883 ~ 27952580 (+) True G76511
TU102453 other downstream 437822 28241783 ~ 28245161 (+) True G76581
TU102473 other downstream 479315 28283276 ~ 28287044 (+) False lim2.5
TU102606 other downstream 716738 28520699 ~ 28521622 (+) True G76707
TU102613 other downstream 749611 28553572 ~ 28569866 (+) True G76714

Expression Profile