Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU102484 |
| length | 561 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G76608 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 28292000 ~ 28292560 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU102444 | lncRNA | upstream | 55661 | 28233612 ~ 28236339 (+) | True | G76579 |
| TU102445 | lncRNA | upstream | 55661 | 28233612 ~ 28236339 (+) | False | G76579 |
| TU102354 | lncRNA | upstream | 264507 | 28025609 ~ 28027493 (+) | False | LOC120561771 |
| TU102356 | lncRNA | upstream | 268633 | 28020998 ~ 28023367 (+) | False | LOC120561771 |
| TU102355 | lncRNA | upstream | 308325 | 27982146 ~ 27983675 (+) | False | ago1 |
| XR_005639885.1 | lncRNA | downstream | 39359 | 28331919 ~ 28346792 (+) | True | LOC120562953 |
| TU102543 | lncRNA | downstream | 122370 | 28414930 ~ 28415653 (+) | False | drd2l |
| TU102549 | lncRNA | downstream | 123629 | 28416189 ~ 28416755 (+) | True | LOC120562434 |
| XR_005639910.1 | lncRNA | downstream | 144655 | 28437215 ~ 28438360 (+) | True | LOC120563095 |
| TU102556 | lncRNA | downstream | 144755 | 28437315 ~ 28438047 (+) | False | LOC120563095 |
| XM_039804678.1 | mRNA | upstream | 4223 | 28283395 ~ 28287777 (+) | True | lim2.5 |
| XM_039806615.1 | mRNA | upstream | 12803 | 28274073 ~ 28279197 (+) | True | vsig10l |
| XM_039806634.1 | mRNA | upstream | 19164 | 28262867 ~ 28272836 (+) | True | etfb |
| XM_039806616.1 | mRNA | upstream | 214737 | 28074190 ~ 28077263 (+) | True | LOC120562747 |
| XM_039806617.1 | mRNA | upstream | 214737 | 28074190 ~ 28077263 (+) | False | LOC120562747 |
| XM_039806915.1 | mRNA | downstream | 55050 | 28347610 ~ 28354162 (+) | True | LOC120562954 |
| XM_039806916.1 | mRNA | downstream | 55052 | 28347612 ~ 28354162 (+) | False | LOC120562954 |
| XM_039806794.1 | mRNA | downstream | 61864 | 28354424 ~ 28379143 (+) | True | xrcc1 |
| XM_039807357.1 | mRNA | downstream | 95537 | 28388097 ~ 28415588 (+) | False | drd2l |
| XM_039807358.1 | mRNA | downstream | 95537 | 28388097 ~ 28415588 (+) | False | drd2l |
| TU102473 | other | upstream | 4956 | 28283276 ~ 28287044 (+) | False | lim2.5 |
| TU102453 | other | upstream | 46839 | 28241783 ~ 28245161 (+) | True | G76581 |
| TU102349 | other | upstream | 339420 | 27948883 ~ 27952580 (+) | True | G76511 |
| TU102237 | other | upstream | 1003543 | 27284538 ~ 27288457 (+) | True | G76417 |
| TU102152 | other | upstream | 1405454 | 26883450 ~ 26886546 (+) | True | G76355 |
| TU102606 | other | downstream | 228139 | 28520699 ~ 28521622 (+) | True | G76707 |
| TU102613 | other | downstream | 261012 | 28553572 ~ 28569866 (+) | True | G76714 |
| XR_005639746.1 | other | downstream | 508091 | 28800651 ~ 28834170 (+) | False | LOC120562342 |
| unassigned_transcript_353 | other | downstream | 553835 | 28846395 ~ 28846466 (+) | True | trnag-ucc_8 |
| unassigned_transcript_354 | other | downstream | 554152 | 28846712 ~ 28846783 (+) | True | trnaa-ugc_7 |
