RNA id: XM_039807359.1


Basic Information

Item Value
RNA id XM_039807359.1
length 3174
RNA type mRNA
GC content 0.48
exon number 8
gene id drd2l
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28388097 ~ 28415653 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GACTGCTCTCTCAAAGGAGCTTCAACAGATAAGCACTGGCCCTCTCCTTCACTCTGGCACGTTGCTGCCTCCTGTTGTGATTGGACTGACTTTTACTACTGTCAAGTGCTATGGCCAGTGGTGGAAGCTCAACAGCCTGACCATGTCCACTGGAGCATGATCATGACTTCCCTCAACGAGTCAGAGGAgacctcccctccctccttccctctctcctcccttgaACACAATTTCTCCCACTTTGTCACCCATGACCCGTCATACTCCCCCATATCCTTCCCCACCTCCTCGCTGGAGCCCTCCAACTGCACCAGCTCCCCGTCAGCCTCCTCTCCTCCGTACAACTTCTACGCCGTGCTGCTGGTGCTCCTGATCTTCTGCGTGGTGTTCGGTAACGTGCTGGTGTGCGTGGCCGTGTCGAGGGAGCGCTCTCTTCAGACCACTACCAACTACCTCATCGTCTCGCTGGCTGTGTCCGACCTGCTGCTGGCCACGCTGGTCATGCCCTGGGGGGTCtacatggagGTGGTTGGAGAGTGGCACTTCAGTCTCATCCACTGTGACATCCTGCTCACCCTGGACGTCATGATGTGCACCGCCAGCATCCTCAACCTCTGCGCCATCAGCATCGACAGATACACAGCGGTAGCCATGCCGATGCTCTACAACACCAGATACAGTTCCAGGAGGAGGGTGGCGGTGATGATTGCTGTGGTGTGGTTCCTCTCCTTTGCCATCTCCTGCCCTTTACTGTTTGGACTCAACAACACTGCCAGCCGGGAAGGCACCACGTGCAGCTTTGCCGATCCGGCCTTCGTGGTGTATTCATCTGTGGCCTCCTTCTACGTTCCCTTCATCGTAACGTTGCTGGTTTATGCGCAGATCTGCGTGGTGCTGCGCAAGCGAGGCAGACGCACCGCCCCACCGCACAGACACGGCCTGCACACACATGGCGGGGCTGATGTTGGAGAAGGTCATCGACACAGGAAGAATAAGTGTACACAACCAGAGGATGTGAAATTGTGCACCCTGATCCTGAGGCCCGCCACCGCTGGCCCACAGCGCAAGAAAGTGCATCCACATCTTTGTTGGTCCCCCAACGCGTACCTCCCTCACCACcctccttcccctctctctatGTGTCAGACCCTGGTTAAGGAGGCGATGGTTCACCCTCTCGAAGTGGAGCCGGGTCAGTTCCTGCCGCAGACCGAGCAGAGCCtggctcctcctcctgctccccaAACCCCCTCCCACTCGGGCCACGCCAGGATCTCCCTGGCCATCTCAGTTGGACCTGCCCCGGTTCTTCCCTCCACTGTGACACGATCGGCCCTGATGCCTCGTCCCGCCACCCTTGAGGACGGCATGAGGGGCCGTGAGGGATGGAGGGAGCGcagtggagggagagagaaatgggGGATGACCAAGGAGAGGGTGAGAGGGAGGCTGTCACAGCAGAAGGAGAGGAAGGCGACAAAGATGCTCGCTATTGTGCTCGGTGTGTTCATCATCTGCTGGCTGCCTTTCTTCCTGACCCACGTGCTGAAGGCCCACTGCAGGAGCTGCTGCATCTCGCCCTCACTGTACAGCGCCGTCACCTGGCTGGGATACCTCAACAGTGCTGTCAACCCTGTCATCTACACCACTTTCAACATCGAGTTTCGCAAAGCCTTCATCAAGATCCTGCACTGCTGAGAGCTGGAGAGAGGAGAAGCGCCAACTGTCAAGCCTGTCGTTGGTTTGAgatcagaggagagagagagtgagagagagagagagagaggtagtcGTCACTTTTGATATACAGGAActgggaggggagggaggggttgAAATGAAAACATGCTAGACGATCATAAAAAGAGAGTGTGACAAGTAAGAGATAGCTAAAAGAACACAAACGAGGCTGGAGATATTTATGGAAAAAATGACATGCACTGCTTTGTGTACATACAGTCTGAAAGAGGAATATATGTGAGGACTGATCTCTCCACAGCATCCAGACTGAAAGACTCCCTGAgacgtgactgttttcccaaaacgtttgctgttgtgtttttcttgtAATCCTGACAACCGGTATCTCGTTATTTGTTCGCATGTGCTCGTCCTTCTCAGAGGACTGGAACAAGTCAAggcaaagggaaaaaaaaactgtgaactGTACacaggagtgttttttttttttgactctcCTGCCAAAGGCTCGACCATTTTTCATACTTTTTGCAACGTTACACCAAGGCAGAATTATTGATTTGCCGATTCAGCGCACATTCACAATCACAGTGAAAAGAGCTTTCATTTAATTAAATGTGTACATGTTTTGCTTTGAATAAGTGTGCGTACATGTAAAATTTGGTCttgtaaataataatttcatTGGTTTAGAAGAGGAATCGCAAGTATTGTACAAACCAttgataataatacatttaaaaaaatacattttattttattgattttgttaACTTTACTAattgtatatgtttttttttacaaggtgATCAGTATTCTAgtaaaacaaaaggaaataagTAGAATAGATTACATAAACATATCTGCAAAATACAAATGAGTGTAATGCatgaatgaaagaaaaatgaaagcaCAACCAATTATAAAACACAAGAGATTTATAAATCCTGTCACTCTCTCAGTGGCACAGAGGTAGTAAAAAAGCAATAAGAGCCCCAATGACTGTGTGATGCAGGTATTGCACACGTTTGAGCTGTTGGTATTCAGTGCACACTGAGGATTTTGGATAAGCCTTGTTATATTTAAAAGCCCCCATCCCGTCTATCAATATGgtgaaaaatacagtttttaatACTGAGATTGGAggatggtgtgtttgtgtttttacctATTGTTTCCCAAAAGATTACGGCATGTTGTAATGCATATTTAAATTAGTCTTTTGCCCTTGAAATATCCTTTTTTCCTTCTTATTGATTACCTTGAAGCTATAGTAGttacgtagtttctgtcgcccccatgaggaattacTGACAACAAAATTGTCGGCACGTTCACATGAAACAAGCCTTCTGTGAGAAATAGAGAGAGTTGTATGGAGCTAATAGTCTTAATtaactttgtagcaactcatttggcaatggcttgaatgtaacggacgttcattaatatgaaAAAGTTACGCCCTAaagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639885.1 lncRNA upstream 49053 28331919 ~ 28346792 (+) True LOC120562953
TU102484 lncRNA upstream 103285 28292000 ~ 28292560 (+) True G76608
TU102444 lncRNA upstream 159506 28233612 ~ 28236339 (+) True G76579
TU102445 lncRNA upstream 159506 28233612 ~ 28236339 (+) False G76579
TU102354 lncRNA upstream 368352 28025609 ~ 28027493 (+) False LOC120561771
TU102549 lncRNA downstream 600 28416189 ~ 28416755 (+) True LOC120562434
XR_005639910.1 lncRNA downstream 21626 28437215 ~ 28438360 (+) True LOC120563095
TU102556 lncRNA downstream 21726 28437315 ~ 28438047 (+) False LOC120563095
TU102604 lncRNA downstream 118454 28534043 ~ 28534766 (+) True G76705
TU102608 lncRNA downstream 127009 28542598 ~ 28542841 (+) True G76709
XM_039806794.1 mRNA upstream 16702 28354424 ~ 28379143 (+) True xrcc1
XM_039806915.1 mRNA upstream 41683 28347610 ~ 28354162 (+) True LOC120562954
XM_039806916.1 mRNA upstream 41683 28347612 ~ 28354162 (+) False LOC120562954
XM_039804678.1 mRNA upstream 108068 28283395 ~ 28287777 (+) True lim2.5
XM_039806615.1 mRNA upstream 116648 28274073 ~ 28279197 (+) True vsig10l
XM_039804943.1 mRNA downstream 4252 28419841 ~ 28431428 (+) True LOC120561728
XM_039807188.1 mRNA downstream 16733 28432322 ~ 28436934 (+) True ethe1
XM_039807064.1 mRNA downstream 25562 28441151 ~ 28471080 (+) True phldb3
XM_039806280.1 mRNA downstream 57087 28472676 ~ 28482599 (+) True LOC120562546
XM_039806993.1 mRNA downstream 234704 28650293 ~ 28657142 (+) True zmp:0000000881
TU102473 other upstream 108801 28283276 ~ 28287044 (+) False lim2.5
TU102453 other upstream 150684 28241783 ~ 28245161 (+) True G76581
TU102349 other upstream 443265 27948883 ~ 27952580 (+) True G76511
TU102237 other upstream 1107388 27284538 ~ 27288457 (+) True G76417
TU102152 other upstream 1509299 26883450 ~ 26886546 (+) True G76355
TU102606 other downstream 105110 28520699 ~ 28521622 (+) True G76707
TU102613 other downstream 137983 28553572 ~ 28569866 (+) True G76714
XR_005639746.1 other downstream 385062 28800651 ~ 28834170 (+) False LOC120562342
unassigned_transcript_353 other downstream 430806 28846395 ~ 28846466 (+) True trnag-ucc_8
unassigned_transcript_354 other downstream 431123 28846712 ~ 28846783 (+) True trnaa-ugc_7

Expression Profile