Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005639910.1 |
| length | 988 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC120563095 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 28437215 ~ 28438360 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU102549 | lncRNA | upstream | 20460 | 28416189 ~ 28416755 (+) | True | LOC120562434 |
| TU102543 | lncRNA | upstream | 21562 | 28414930 ~ 28415653 (+) | False | drd2l |
| XR_005639885.1 | lncRNA | upstream | 90423 | 28331919 ~ 28346792 (+) | True | LOC120562953 |
| TU102484 | lncRNA | upstream | 144655 | 28292000 ~ 28292560 (+) | True | G76608 |
| TU102444 | lncRNA | upstream | 200876 | 28233612 ~ 28236339 (+) | True | G76579 |
| TU102604 | lncRNA | downstream | 95683 | 28534043 ~ 28534766 (+) | True | G76705 |
| TU102608 | lncRNA | downstream | 104238 | 28542598 ~ 28542841 (+) | True | G76709 |
| TU102609 | lncRNA | downstream | 106445 | 28544805 ~ 28545095 (+) | True | G76710 |
| TU102611 | lncRNA | downstream | 111748 | 28550108 ~ 28550378 (+) | True | G76712 |
| TU102617 | lncRNA | downstream | 123184 | 28561544 ~ 28572251 (+) | True | G76717 |
| XM_039807188.1 | mRNA | upstream | 281 | 28432322 ~ 28436934 (+) | True | ethe1 |
| XM_039804943.1 | mRNA | upstream | 5787 | 28419841 ~ 28431428 (+) | True | LOC120561728 |
| XM_039806147.1 | mRNA | upstream | 20722 | 28414518 ~ 28416493 (+) | False | LOC120562434 |
| XM_039807359.1 | mRNA | upstream | 21626 | 28395845 ~ 28415589 (+) | True | drd2l |
| XM_039807357.1 | mRNA | upstream | 21627 | 28388097 ~ 28415588 (+) | False | drd2l |
| XM_039807064.1 | mRNA | downstream | 2791 | 28441151 ~ 28471080 (+) | True | phldb3 |
| XM_039806280.1 | mRNA | downstream | 34316 | 28472676 ~ 28482599 (+) | True | LOC120562546 |
| XM_039806993.1 | mRNA | downstream | 211933 | 28650293 ~ 28657142 (+) | True | zmp:0000000881 |
| XM_039804942.1 | mRNA | downstream | 261540 | 28699900 ~ 28705326 (+) | True | LOC120561727 |
| XM_039806064.1 | mRNA | downstream | 272277 | 28710637 ~ 28728274 (+) | True | scn1ba |
| TU102473 | other | upstream | 150171 | 28283276 ~ 28287044 (+) | False | lim2.5 |
| TU102453 | other | upstream | 192054 | 28241783 ~ 28245161 (+) | True | G76581 |
| TU102349 | other | upstream | 484635 | 27948883 ~ 27952580 (+) | True | G76511 |
| TU102237 | other | upstream | 1148758 | 27284538 ~ 27288457 (+) | True | G76417 |
| TU102152 | other | upstream | 1550669 | 26883450 ~ 26886546 (+) | True | G76355 |
| TU102606 | other | downstream | 82339 | 28520699 ~ 28521622 (+) | True | G76707 |
| TU102613 | other | downstream | 115212 | 28553572 ~ 28569866 (+) | True | G76714 |
| XR_005639746.1 | other | downstream | 362291 | 28800651 ~ 28834170 (+) | False | LOC120562342 |
| unassigned_transcript_353 | other | downstream | 408035 | 28846395 ~ 28846466 (+) | True | trnag-ucc_8 |
| unassigned_transcript_354 | other | downstream | 408352 | 28846712 ~ 28846783 (+) | True | trnaa-ugc_7 |
