RNA id: TU103897



Basic Information


Item Value
RNA id TU103897
length 398
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G77695
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31957249 ~ 31961651 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggggggggggGGGGTAGTGTCTGCCTAGTTGGCTGCTTGGGGCCGTCCCTCTGGGATGAGCGAGGTGAAGAAGGTGCTGATGAAGGACCACGCGGTGGTAAGGAAGCTTGGTTCTGGGAGAGCAGCGGCGGCAGCAGCCTGGGCCGGGTCCTCAGGGCCTCCCCCTCCTTCCTCGCCGCTGTCGTCCTCCTCCATCCCCTCATCCATCAGACGTTCCTGGGACACAGACGGGAGGAGACATTCGtggttagagagacagagaatagTGAAGATGTAGTGCCATATTCAGACATGCAAGCTGATCAACGGTCAATGACCATAGTGTTTCGGCTTGCAGCGGTAAATCTTCCAAATTGGATTTGACTCAAATCTGGTGGAAACTTCGGCCATGTGCAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103795 lncRNA downstream 315009 31643077 ~ 31643282 (-) True G77608
TU103784 lncRNA downstream 331410 31626584 ~ 31626881 (-) False LOC120562592
XR_005639911.1 lncRNA downstream 382888 31547784 ~ 31575403 (-) True LOC120563104
TU103760 lncRNA downstream 434324 31523644 ~ 31523967 (-) True G77577
TU103755 lncRNA downstream 441892 31515230 ~ 31516399 (-) True G77572
TU103899 lncRNA upstream 14982 31976633 ~ 31977527 (-) False tbx20
TU103922 lncRNA upstream 160924 32122575 ~ 32124370 (-) True G77718
TU103924 lncRNA upstream 163013 32124664 ~ 32127330 (-) True G77720
TU103951 lncRNA upstream 210400 32172051 ~ 32174497 (-) True G77741
TU104027 lncRNA upstream 265617 32227268 ~ 32294617 (-) False G77793
XM_039805807.1 mRNA downstream 15527 31933067 ~ 31942764 (-) True ankmy2a
XM_039806454.1 mRNA downstream 35583 31918056 ~ 31922708 (-) True sostdc1a
XM_039806451.1 mRNA downstream 41419 31863992 ~ 31916872 (-) False crppa
XM_039807287.1 mRNA upstream 14833 31976484 ~ 31990365 (-) False tbx20
XM_039807286.1 mRNA upstream 14833 31976484 ~ 31990365 (-) True tbx20
XM_039805806.1 mRNA upstream 165771 32127422 ~ 32136906 (-) False LOC120562215
XM_039805805.1 mRNA upstream 165771 32127422 ~ 32136906 (-) True LOC120562215
XM_039805803.1 mRNA upstream 177127 32138778 ~ 32143278 (-) True LOC120562213
TU103756 other downstream 439255 31516455 ~ 31519036 (-) True G77573
XR_005639672.1 other downstream 561788 31239787 ~ 31396503 (-) False LOC120561969
TU104072 other upstream 463746 32425397 ~ 32433657 (-) False LOC120561540
XR_005639667.1 other upstream 1628870 33590521 ~ 33597305 (-) False LOC120561932
TU104595 other upstream 2133992 34095643 ~ 34146296 (-) True G78245
TU104620 other upstream 2168392 34130043 ~ 34132106 (-) False LOC120561744
TU104706 other upstream 2530695 34492346 ~ 34493195 (-) True G78321

Expression Profile