Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104327 |
| length | 1059 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC120562157 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 33894360 ~ 33904285 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104275 | lncRNA | upstream | 306116 | 33564020 ~ 33588256 (+) | True | G78000 |
| XR_005639668.1 | lncRNA | upstream | 306280 | 33583805 ~ 33588092 (+) | True | LOC120561935 |
| TU104277 | lncRNA | upstream | 375857 | 33515709 ~ 33518515 (+) | True | G78002 |
| TU104276 | lncRNA | upstream | 400712 | 33493424 ~ 33493660 (+) | True | G78001 |
| TU104267 | lncRNA | upstream | 434137 | 33460022 ~ 33460235 (+) | True | G77993 |
| TU104334 | lncRNA | downstream | 18730 | 33922993 ~ 33923230 (+) | True | G78052 |
| TU104336 | lncRNA | downstream | 33996 | 33938259 ~ 33938468 (+) | True | G78054 |
| TU104337 | lncRNA | downstream | 46510 | 33950773 ~ 33951005 (+) | True | G78055 |
| TU104416 | lncRNA | downstream | 58531 | 33962794 ~ 33963092 (+) | True | G78117 |
| XR_005639657.1 | lncRNA | downstream | 80586 | 33984849 ~ 33987987 (+) | True | LOC120561795 |
| XM_039806161.1 | mRNA | upstream | 15240 | 33826087 ~ 33879132 (+) | True | bmper |
| XM_039806472.1 | mRNA | upstream | 71543 | 33632641 ~ 33822829 (+) | True | bbs9 |
| XM_039806473.1 | mRNA | upstream | 71543 | 33632641 ~ 33822829 (+) | False | bbs9 |
| XM_039806731.1 | mRNA | upstream | 265427 | 33605847 ~ 33628945 (+) | False | nt5c3a |
| XM_039806469.1 | mRNA | downstream | 2127 | 33906390 ~ 33911214 (+) | True | mettl6 |
| XM_039806468.1 | mRNA | downstream | 12736 | 33916999 ~ 33919175 (+) | True | LOC120562644 |
| XM_039806470.1 | mRNA | downstream | 18315 | 33922578 ~ 33935943 (+) | True | LOC120562646 |
| XM_039806471.1 | mRNA | downstream | 18320 | 33922583 ~ 33935943 (+) | False | LOC120562646 |
| XM_039806163.1 | mRNA | downstream | 86279 | 33990542 ~ 34042648 (+) | True | sh3bp5b |
| TU104301 | other | upstream | 33260 | 33839076 ~ 33861112 (+) | False | bmper |
| unassigned_transcript_357 | other | upstream | 262659 | 33631642 ~ 33631713 (+) | True | trnap-agg_5 |
| unassigned_transcript_356 | other | upstream | 263262 | 33631039 ~ 33631110 (+) | True | trnap-agg_4 |
| unassigned_transcript_355 | other | upstream | 268370 | 33625931 ~ 33626002 (+) | True | trnap-agg_3 |
| TU104140 | other | upstream | 792838 | 33100413 ~ 33101534 (+) | True | G77888 |
| TU104420 | other | downstream | 86332 | 33990595 ~ 34035967 (+) | False | sh3bp5b |
| TU104540 | other | downstream | 625092 | 34529355 ~ 34544379 (+) | False | G78200 |
| TU104752 | other | downstream | 934894 | 34839157 ~ 34856532 (+) | False | LOC120562567 |
| unassigned_transcript_361 | other | downstream | 1283855 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
| TU105077 | other | downstream | 1501112 | 35405375 ~ 35408682 (+) | True | G78594 |
