Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104416 |
| length | 299 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G78117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 33962794 ~ 33963092 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104337 | lncRNA | upstream | 11789 | 33950773 ~ 33951005 (+) | True | G78055 |
| TU104336 | lncRNA | upstream | 24326 | 33938259 ~ 33938468 (+) | True | G78054 |
| TU104334 | lncRNA | upstream | 39564 | 33922993 ~ 33923230 (+) | True | G78052 |
| TU104275 | lncRNA | upstream | 374538 | 33564020 ~ 33588256 (+) | True | G78000 |
| XR_005639668.1 | lncRNA | upstream | 374702 | 33583805 ~ 33588092 (+) | True | LOC120561935 |
| XR_005639657.1 | lncRNA | downstream | 21757 | 33984849 ~ 33987987 (+) | True | LOC120561795 |
| TU104431 | lncRNA | downstream | 75749 | 34038841 ~ 34042633 (+) | False | sh3bp5b |
| TU104434 | lncRNA | downstream | 85348 | 34048440 ~ 34053736 (+) | True | G78134 |
| XR_005639642.1 | lncRNA | downstream | 285937 | 34249029 ~ 34251208 (+) | True | LOC120561759 |
| XR_005639645.1 | lncRNA | downstream | 327670 | 34290762 ~ 34294584 (+) | True | LOC120561762 |
| XM_039806470.1 | mRNA | upstream | 26851 | 33922578 ~ 33935943 (+) | True | LOC120562646 |
| XM_039806471.1 | mRNA | upstream | 26851 | 33922583 ~ 33935943 (+) | False | LOC120562646 |
| XM_039806468.1 | mRNA | upstream | 43619 | 33916999 ~ 33919175 (+) | True | LOC120562644 |
| XM_039806469.1 | mRNA | upstream | 51580 | 33906390 ~ 33911214 (+) | True | mettl6 |
| XM_039805693.1 | mRNA | upstream | 58509 | 33894362 ~ 33904285 (+) | True | LOC120562157 |
| XM_039806163.1 | mRNA | downstream | 27450 | 33990542 ~ 34042648 (+) | True | sh3bp5b |
| XM_039806542.1 | mRNA | downstream | 121003 | 34084095 ~ 34088746 (+) | True | LOC120562692 |
| XM_039804950.1 | mRNA | downstream | 456815 | 34419907 ~ 34441093 (+) | True | LOC120561733 |
| XM_039804952.1 | mRNA | downstream | 456815 | 34419907 ~ 34441093 (+) | False | LOC120561733 |
| XM_039804951.1 | mRNA | downstream | 457716 | 34420808 ~ 34441093 (+) | False | LOC120561733 |
| TU104327 | other | upstream | 58531 | 33894372 ~ 33904263 (+) | False | LOC120562157 |
| TU104301 | other | upstream | 101682 | 33839076 ~ 33861112 (+) | False | bmper |
| unassigned_transcript_357 | other | upstream | 331081 | 33631642 ~ 33631713 (+) | True | trnap-agg_5 |
| unassigned_transcript_356 | other | upstream | 331684 | 33631039 ~ 33631110 (+) | True | trnap-agg_4 |
| unassigned_transcript_355 | other | upstream | 336792 | 33625931 ~ 33626002 (+) | True | trnap-agg_3 |
| TU104420 | other | downstream | 27503 | 33990595 ~ 34035967 (+) | False | sh3bp5b |
| TU104540 | other | downstream | 566263 | 34529355 ~ 34544379 (+) | False | G78200 |
| TU104752 | other | downstream | 876065 | 34839157 ~ 34856532 (+) | False | LOC120562567 |
| unassigned_transcript_361 | other | downstream | 1225026 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
| TU105077 | other | downstream | 1442283 | 35405375 ~ 35408682 (+) | True | G78594 |
