Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104500 |
| length | 961 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC120561758 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 34342514 ~ 34345393 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104490 | lncRNA | upstream | 18155 | 34316811 ~ 34324359 (+) | True | G78180 |
| TU104487 | lncRNA | upstream | 19500 | 34316811 ~ 34323014 (+) | False | G78180 |
| TU104495 | lncRNA | upstream | 19500 | 34316811 ~ 34323014 (+) | False | G78180 |
| XR_005639645.1 | lncRNA | upstream | 47930 | 34290762 ~ 34294584 (+) | True | LOC120561762 |
| XR_005639642.1 | lncRNA | upstream | 91306 | 34249029 ~ 34251208 (+) | True | LOC120561759 |
| TU104533 | lncRNA | downstream | 123513 | 34468906 ~ 34469457 (+) | False | G78195 |
| TU104534 | lncRNA | downstream | 123513 | 34468906 ~ 34469457 (+) | True | G78195 |
| XR_005639650.1 | lncRNA | downstream | 157480 | 34502873 ~ 34505357 (+) | True | LOC120561766 |
| TU104541 | lncRNA | downstream | 183962 | 34529355 ~ 34544379 (+) | True | G78200 |
| TU104566 | lncRNA | downstream | 289362 | 34634755 ~ 34658151 (+) | True | G78219 |
| XM_039806542.1 | mRNA | upstream | 253768 | 34084095 ~ 34088746 (+) | True | LOC120562692 |
| XM_039806163.1 | mRNA | upstream | 299866 | 33990542 ~ 34042648 (+) | True | sh3bp5b |
| XM_039806470.1 | mRNA | upstream | 406571 | 33922578 ~ 33935943 (+) | True | LOC120562646 |
| XM_039806471.1 | mRNA | upstream | 406571 | 33922583 ~ 33935943 (+) | False | LOC120562646 |
| XM_039806468.1 | mRNA | upstream | 423339 | 33916999 ~ 33919175 (+) | True | LOC120562644 |
| XM_039804950.1 | mRNA | downstream | 74514 | 34419907 ~ 34441093 (+) | True | LOC120561733 |
| XM_039804952.1 | mRNA | downstream | 74514 | 34419907 ~ 34441093 (+) | False | LOC120561733 |
| XM_039804951.1 | mRNA | downstream | 75415 | 34420808 ~ 34441093 (+) | False | LOC120561733 |
| XM_039804954.1 | mRNA | downstream | 264517 | 34609910 ~ 34622583 (+) | True | nes |
| XM_039807294.1 | mRNA | downstream | 606659 | 34952052 ~ 34964798 (+) | False | hapln2 |
| TU104420 | other | upstream | 306547 | 33990595 ~ 34035967 (+) | False | sh3bp5b |
| TU104327 | other | upstream | 438251 | 33894372 ~ 33904263 (+) | False | LOC120562157 |
| TU104301 | other | upstream | 481402 | 33839076 ~ 33861112 (+) | False | bmper |
| unassigned_transcript_357 | other | upstream | 710801 | 33631642 ~ 33631713 (+) | True | trnap-agg_5 |
| unassigned_transcript_356 | other | upstream | 711404 | 33631039 ~ 33631110 (+) | True | trnap-agg_4 |
| TU104540 | other | downstream | 183962 | 34529355 ~ 34544379 (+) | False | G78200 |
| TU104752 | other | downstream | 493764 | 34839157 ~ 34856532 (+) | False | LOC120562567 |
| unassigned_transcript_361 | other | downstream | 842725 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
| TU105077 | other | downstream | 1059982 | 35405375 ~ 35408682 (+) | True | G78594 |
| TU105193 | other | downstream | 1520449 | 35865842 ~ 35888172 (+) | False | LOC120562279 |
