Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104595 |
| length | 633 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 5 |
| gene id | G78245 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 34095643 ~ 34146296 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04141 | Protein processing in endoplasmic reticulum |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104452 | lncRNA | downstream | 90 | 34095284 ~ 34095553 (-) | False | LOC120561752 |
| TU104417 | lncRNA | downstream | 132402 | 33962752 ~ 33963241 (-) | True | G78118 |
| TU104409 | lncRNA | downstream | 186758 | 33906420 ~ 33908885 (-) | True | G78110 |
| TU104392 | lncRNA | downstream | 210917 | 33881005 ~ 33884726 (-) | True | G78097 |
| TU104385 | lncRNA | downstream | 223851 | 33737185 ~ 33871792 (-) | True | G78094 |
| XR_005639652.1 | lncRNA | upstream | 88918 | 34235214 ~ 34235852 (-) | True | LOC120561768 |
| XR_005639644.1 | lncRNA | upstream | 110363 | 34256659 ~ 34257473 (-) | True | LOC120561761 |
| TU104629 | lncRNA | upstream | 123099 | 34269395 ~ 34270001 (-) | False | LOC120561747 |
| TU104638 | lncRNA | upstream | 123984 | 34270280 ~ 34271012 (-) | False | LOC120561747 |
| XR_005639640.1 | lncRNA | upstream | 127943 | 34274239 ~ 34276133 (-) | True | LOC120561757 |
| XM_039806378.1 | mRNA | downstream | 14242 | 34048438 ~ 34081401 (-) | False | capn7 |
| XM_039806377.1 | mRNA | downstream | 14242 | 34048438 ~ 34081401 (-) | True | capn7 |
| XM_039805692.1 | mRNA | downstream | 201834 | 33879773 ~ 33893809 (-) | True | eaf1 |
| XM_039805277.1 | mRNA | downstream | 492695 | 33590521 ~ 33602948 (-) | True | LOC120561932 |
| XM_039805278.1 | mRNA | downstream | 492700 | 33599029 ~ 33602943 (-) | False | LOC120561932 |
| XM_039804978.1 | mRNA | upstream | 17499 | 34163795 ~ 34172230 (-) | True | LOC120561746 |
| XM_039804985.1 | mRNA | upstream | 26472 | 34172768 ~ 34188410 (-) | True | LOC120561751 |
| XM_039804973.1 | mRNA | upstream | 66036 | 34212332 ~ 34219024 (-) | True | LOC120561742 |
| XM_039804974.1 | mRNA | upstream | 66611 | 34212907 ~ 34219024 (-) | False | LOC120561742 |
| XM_039804980.1 | mRNA | upstream | 115230 | 34261526 ~ 34273652 (-) | True | LOC120561747 |
| XR_005639667.1 | other | downstream | 498338 | 33590521 ~ 33597305 (-) | False | LOC120561932 |
| TU104072 | other | downstream | 1661986 | 32425397 ~ 32433657 (-) | False | LOC120561540 |
| TU103756 | other | downstream | 2576607 | 31516455 ~ 31519036 (-) | True | G77573 |
| XR_005639671.1 | other | downstream | 2699140 | 31239787 ~ 31396503 (-) | False | LOC120561969 |
| TU104706 | other | upstream | 346050 | 34492346 ~ 34493195 (-) | True | G78321 |
| TU104838 | other | upstream | 828528 | 34974824 ~ 34977961 (-) | False | bcan |
| TU104853 | other | upstream | 865807 | 35012103 ~ 35014522 (-) | True | G78444 |
| unassigned_transcript_358 | other | upstream | 987368 | 35133664 ~ 35133735 (-) | True | trnap-agg_6 |
| unassigned_transcript_359 | other | upstream | 988695 | 35134991 ~ 35135062 (-) | True | trnap-ugg_1 |
