RNA id: TU104755


Basic Information

Item Value
RNA id TU104755
length 356
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G78366
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34914357 ~ 34918069 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aacgaGTGCTAGGATGTTAAAACctcagagtgagtgtgtgtgtgtgtgtgtgtacacacacgcacacacacacactgagtgaaacaaaacaagcaaattcATCAACATCCCCGTCACCCTGAcctgcatgtgcgtgtgtgtaagatactgtctgtgtgtaacatactgtgtgtgtgtaacatacTGTCTGTGTAacatactgtctgtgtgtgtgtaagatacTATGTGTGCGTCTAAGCGTTGAGCCTCTCAGTCTCCGTCATCCTCACAGTGGCCTTATCCTGATGGTCCTCCTCCTCGTCCCCAGGCACCTCCCAGTAGATGTTGTCCTCAAAGCAGATTGTGTCAGGAGGAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104750 lncRNA upstream 57825 34839157 ~ 34856532 (+) False LOC120562567
TU104751 lncRNA upstream 57825 34839157 ~ 34856532 (+) False LOC120562567
TU104753 lncRNA upstream 57825 34839157 ~ 34856532 (+) False LOC120562567
TU104754 lncRNA upstream 57825 34844239 ~ 34856532 (+) True LOC120562567
XR_005639791.1 lncRNA upstream 57832 34839160 ~ 34856525 (+) False LOC120562567
TU104847 lncRNA downstream 112839 35030908 ~ 35031135 (+) True G78440
TU104947 lncRNA downstream 250843 35168912 ~ 35173203 (+) True G78488
TU104979 lncRNA downstream 288862 35206931 ~ 35207166 (+) True G78516
TU104981 lncRNA downstream 312382 35230451 ~ 35230899 (+) True G78518
TU104982 lncRNA downstream 314077 35232146 ~ 35232446 (+) True G78519
XM_039804954.1 mRNA upstream 291774 34609910 ~ 34622583 (+) True nes
XM_039804950.1 mRNA upstream 473264 34419907 ~ 34441093 (+) True LOC120561733
XM_039804952.1 mRNA upstream 473264 34419907 ~ 34441093 (+) False LOC120561733
XM_039804951.1 mRNA upstream 473264 34420808 ~ 34441093 (+) False LOC120561733
XM_039806542.1 mRNA upstream 825611 34084095 ~ 34088746 (+) True LOC120562692
XM_039807294.1 mRNA downstream 33983 34952052 ~ 34964798 (+) False hapln2
XM_039807292.1 mRNA downstream 33983 34952052 ~ 34964134 (+) True hapln2
XM_039807293.1 mRNA downstream 33983 34952052 ~ 34963856 (+) False hapln2
XM_039807365.1 mRNA downstream 125152 35043221 ~ 35058363 (+) True rrnad1
XM_039807366.1 mRNA downstream 127233 35045302 ~ 35058363 (+) False rrnad1
TU104752 other upstream 57825 34839157 ~ 34856532 (+) False LOC120562567
TU104540 other upstream 369978 34529355 ~ 34544379 (+) False G78200
TU104420 other upstream 878390 33990595 ~ 34035967 (+) False sh3bp5b
TU104327 other upstream 1010094 33894372 ~ 33904263 (+) False LOC120562157
TU104301 other upstream 1053245 33839076 ~ 33861112 (+) False bmper
unassigned_transcript_361 other downstream 270049 35188118 ~ 35188199 (+) True trnas-aga_7
TU105077 other downstream 487306 35405375 ~ 35408682 (+) True G78594
TU105193 other downstream 947773 35865842 ~ 35888172 (+) False LOC120562279
TU105334 other downstream 1219690 36137759 ~ 36141222 (+) False G78759
TU105369 other downstream 1375918 36293987 ~ 36350995 (+) True G78772

Expression Profile