Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104979 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G78516 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 35206931 ~ 35207166 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104947 | lncRNA | upstream | 33728 | 35168912 ~ 35173203 (+) | True | G78488 |
| TU104847 | lncRNA | upstream | 175796 | 35030908 ~ 35031135 (+) | True | G78440 |
| TU104755 | lncRNA | upstream | 288862 | 34914357 ~ 34918069 (+) | True | G78366 |
| TU104754 | lncRNA | upstream | 350399 | 34844239 ~ 34856532 (+) | True | LOC120562567 |
| XR_005639792.1 | lncRNA | upstream | 350406 | 34839160 ~ 34856525 (+) | False | LOC120562567 |
| TU104981 | lncRNA | downstream | 23285 | 35230451 ~ 35230899 (+) | True | G78518 |
| TU104982 | lncRNA | downstream | 24980 | 35232146 ~ 35232446 (+) | True | G78519 |
| TU104987 | lncRNA | downstream | 32871 | 35240037 ~ 35240487 (+) | True | G78524 |
| TU104988 | lncRNA | downstream | 35166 | 35242332 ~ 35242570 (+) | True | G78525 |
| TU104990 | lncRNA | downstream | 37581 | 35244747 ~ 35244991 (+) | True | G78527 |
| XM_039806875.1 | mRNA | upstream | 5537 | 35188683 ~ 35201394 (+) | True | c7h8orf37 |
| XM_039806876.1 | mRNA | upstream | 5537 | 35188683 ~ 35201394 (+) | False | c7h8orf37 |
| XM_039806851.1 | mRNA | upstream | 23374 | 35177408 ~ 35183557 (+) | True | cd83 |
| XM_039806533.1 | mRNA | upstream | 38751 | 35129114 ~ 35168180 (+) | True | zgc:113232 |
| XM_039806534.1 | mRNA | upstream | 79220 | 35119433 ~ 35127711 (+) | True | snrnp48 |
| XM_039806874.1 | mRNA | downstream | 981 | 35208147 ~ 35230312 (+) | True | wdr73 |
| XM_039804894.1 | mRNA | downstream | 150088 | 35357254 ~ 35362521 (+) | True | LOC120561699 |
| XM_039804887.1 | mRNA | downstream | 241402 | 35448568 ~ 35489477 (+) | True | nagpa |
| XM_039804888.1 | mRNA | downstream | 241402 | 35448568 ~ 35489477 (+) | False | nagpa |
| XM_039804889.1 | mRNA | downstream | 301167 | 35508333 ~ 35528009 (+) | True | tp53inp1 |
| unassigned_transcript_361 | other | upstream | 18732 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
| TU104752 | other | upstream | 350399 | 34839157 ~ 34856532 (+) | False | LOC120562567 |
| TU104540 | other | upstream | 662552 | 34529355 ~ 34544379 (+) | False | G78200 |
| TU104420 | other | upstream | 1170964 | 33990595 ~ 34035967 (+) | False | sh3bp5b |
| TU104327 | other | upstream | 1302668 | 33894372 ~ 33904263 (+) | False | LOC120562157 |
| TU105077 | other | downstream | 198209 | 35405375 ~ 35408682 (+) | True | G78594 |
| TU105193 | other | downstream | 658676 | 35865842 ~ 35888172 (+) | False | LOC120562279 |
| TU105334 | other | downstream | 930593 | 36137759 ~ 36141222 (+) | False | G78759 |
| TU105369 | other | downstream | 1086821 | 36293987 ~ 36350995 (+) | True | G78772 |
| TU105393 | other | downstream | 1185086 | 36392252 ~ 36434225 (+) | False | LOC120563181 |
