RNA id: TU105463


Basic Information

Item Value
RNA id TU105463
length 336
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G78836
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36534793 ~ 36642606 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacactcacacacacacacacacacacagagacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacacacagaaacacacacacacacacacagacagataaaccgacacagagacacagacacagacacacacacacacacacacacacacacagagacacacacacacacagatacacacacacacacacacacacacacacacacagagacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105422 lncRNA upstream 26979 36446709 ~ 36507814 (+) True G78813
TU105419 lncRNA upstream 26979 36469256 ~ 36507814 (+) False G78813
TU105392 lncRNA upstream 84583 36449783 ~ 36450210 (+) False LOC120563181
TU105421 lncRNA upstream 87578 36446647 ~ 36447215 (+) False G78813
TU105400 lncRNA upstream 118909 36398049 ~ 36415884 (+) True G78798
TU105481 lncRNA downstream 9958 36600433 ~ 36601220 (+) False G78844
TU105487 lncRNA downstream 15196 36605671 ~ 36606317 (+) True G78850
TU105472 lncRNA downstream 22035 36612510 ~ 36629043 (+) False LOC120562456
TU105468 lncRNA downstream 51358 36641833 ~ 36643491 (+) True G78837
TU105466 lncRNA downstream 51682 36642157 ~ 36643491 (+) False G78837
XM_039807337.1 mRNA upstream 84589 36392257 ~ 36450204 (+) True LOC120563181
XM_039807338.1 mRNA upstream 151697 36368694 ~ 36383096 (+) True LOC120563182
XM_039807339.1 mRNA upstream 167768 36360700 ~ 36367025 (+) True nat16l
XM_039807329.1 mRNA upstream 344378 36178207 ~ 36190415 (+) True LOC120563177
XM_039806169.1 mRNA downstream 38426 36628901 ~ 36670029 (+) True LOC120562456
XM_039806171.1 mRNA downstream 95461 36685936 ~ 36703993 (+) False LOC120562457
XM_039806172.1 mRNA downstream 170035 36760510 ~ 36792668 (+) True atp2c1
XM_039807332.1 mRNA downstream 219085 36809560 ~ 36829422 (+) False LOC120563178
XM_039807334.1 mRNA downstream 221393 36811868 ~ 36829422 (+) False LOC120563178
TU105394 other upstream 69563 36392252 ~ 36465230 (+) False LOC120563181
TU105393 other upstream 100568 36392252 ~ 36434225 (+) False LOC120563181
TU105369 other upstream 183798 36293987 ~ 36350995 (+) True G78772
TU105334 other upstream 393571 36137759 ~ 36141222 (+) False G78759
TU105193 other upstream 646621 35865842 ~ 35888172 (+) False LOC120562279
TU105437 other downstream 100918 36691393 ~ 36703865 (+) True LOC120562457
TU105558 other downstream 336237 36926712 ~ 36928871 (+) False G78888
TU105685 other downstream 840696 37431171 ~ 37432679 (+) True G78989
TU105717 other downstream 940215 37530690 ~ 37533069 (+) False G79007
TU105719 other downstream 940215 37530690 ~ 37533069 (+) True G79007

Expression Profile