RNA id: TU105469


Basic Information

Item Value
RNA id TU105469
length 446
lncRNA type intronic
GC content 0.50
exon number 3
gene id G78837
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36578832 ~ 36643491 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacagacacacacacacacacacacacacacagagagacacacacacacagacacacacacacagagacacacacacacacacagagacacacacacagagacacacacacacagagagacacacacacacagagacacacacacacacagacacacacacacagagacacacacacagagagacacacacacagagacacacacacacacagagacacacacacagagacacacacacacagagagacacacacacagagacacacacacacagagacacacacacagagacacatacacacagacacacacacagacacacagagagagagacaaacacacacagagacacacacacagagacacacacacacagagacacacacacacacacacagagagacacacacacagagagacacacacacagagacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105471 lncRNA upstream 13114 36580965 ~ 36629043 (+) False LOC120562456
TU105472 lncRNA upstream 13114 36612510 ~ 36629043 (+) False LOC120562456
TU105487 lncRNA upstream 35840 36605671 ~ 36606317 (+) True G78850
TU105480 lncRNA upstream 40937 36582192 ~ 36601220 (+) True G78844
TU105481 lncRNA upstream 40937 36600433 ~ 36601220 (+) False G78844
TU105505 lncRNA downstream 14517 36658008 ~ 36658306 (+) True G78862
TU105506 lncRNA downstream 23106 36666597 ~ 36667363 (+) True G78863
TU105445 lncRNA downstream 41342 36684833 ~ 36713725 (+) False G78825
TU105513 lncRNA downstream 48707 36692198 ~ 36694660 (+) False G78865
TU105508 lncRNA downstream 49516 36693007 ~ 36695532 (+) False G78865
XM_039807340.1 mRNA upstream 100627 36528481 ~ 36541530 (+) True LOC120563185
XM_039807337.1 mRNA upstream 191953 36392257 ~ 36450204 (+) True LOC120563181
XM_039807338.1 mRNA upstream 259061 36368694 ~ 36383096 (+) True LOC120563182
XM_039807339.1 mRNA upstream 275132 36360700 ~ 36367025 (+) True nat16l
XM_039807330.1 mRNA upstream 451742 36178207 ~ 36190415 (+) False LOC120563177
XM_039806171.1 mRNA downstream 42445 36685936 ~ 36703993 (+) False LOC120562457
XM_039806172.1 mRNA downstream 117019 36760510 ~ 36792668 (+) True atp2c1
XM_039807332.1 mRNA downstream 166069 36809560 ~ 36829422 (+) False LOC120563178
XM_039807334.1 mRNA downstream 168377 36811868 ~ 36829422 (+) False LOC120563178
XM_039807333.1 mRNA downstream 172901 36816392 ~ 36829422 (+) True LOC120563178
TU105394 other upstream 176927 36392252 ~ 36465230 (+) False LOC120563181
TU105393 other upstream 207932 36392252 ~ 36434225 (+) False LOC120563181
TU105369 other upstream 291162 36293987 ~ 36350995 (+) True G78772
TU105334 other upstream 500935 36137759 ~ 36141222 (+) False G78759
TU105193 other upstream 753985 35865842 ~ 35888172 (+) False LOC120562279
TU105437 other downstream 47902 36691393 ~ 36703865 (+) True LOC120562457
TU105558 other downstream 283221 36926712 ~ 36928871 (+) False G78888
TU105685 other downstream 787680 37431171 ~ 37432679 (+) True G78989
TU105717 other downstream 887199 37530690 ~ 37533069 (+) False G79007
TU105719 other downstream 887199 37530690 ~ 37533069 (+) True G79007

Expression Profile