RNA id: TU105799



Basic Information


Item Value
RNA id TU105799
length 856
RNA type TUCP
GC content 0.64
exon number 5
gene id creb3l4
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36339081 ~ 36359580 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCGCCAACAAACCACACTGAAGCTATAATAGAGAGGAGGAAGACGCCGACTTGTTGTGTTGTGCAGGCTGGACTATAGGCTGGAGGCTGGACCCCGGACCCGGACGCGGAGCTGCCAGCTGGACTCTTTATTATTCCCCGTAAGAACCGAGAGAAAGCAGCGGGTTGAAGCGGTTCGTGTTGCCCGCCCTGCGGCCGCGGAGGGGCCGCTGTGTGATGAACCAGCCGACGGACTGAAGTCTTCGGAAAGAAACCCAAGCAGCTGTCAGCGCACAGCCATGGATGCAGAGAACGGCGAGCTGTTCGCCGCCGGCGTGGCGGCAGACGGCTGGCAGCTCGACGCTCCCTTCTCCTGCTCCGACCTCGTGTTCAGCGGCTCGGCGAAACCCCTGCAGGACTGGGTGGTGGACCCCGACTGTCAGACGCTGAACGACAGCGAATCGGAGGACGTCCTTCACGGCGTGGACCCAAACGAGGTGTTCCCCAGCGGGCTGCCTGCAGACTGCTCGTCCGAGAGCGACAGCGGCATCTCGGAGGACCCCGTCGCCGAGAGTCCCTTCACCGCGGCGACCGCGACCACCCCGCAGCCGGCCACCGTGTACCAGGTGGTTTATGACATCAGCGGCCTCGGCGCCGTGAAGACGGAACCGGGACTGGAGAACGTCATCTCCATAGAGCTCGATGCGTGGAGCTCCCAGATGTTGTTTCCAGACTCGTGCGTCGTGAACGAGCTTCCCGTGGCGCCGCCGGCTCGCCTCGACGGACGTCTGACCGTCGGCGACCCTCCCGGCCCCGACGCTCACCTGCTGTCCCCGGAGCTGCAGCTGACGGAGGAGGAACAGAAGCTGCTGACGCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105795 lncRNA downstream 108090 36235912 ~ 36241139 (-) True G79059
TU105794 lncRNA downstream 144165 36202693 ~ 36205064 (-) True G79058
TU105775 lncRNA downstream 158651 36125970 ~ 36190578 (-) False G79044
TU105774 lncRNA downstream 160942 36125970 ~ 36188287 (-) False G79044
TU105822 lncRNA upstream 21493 36381073 ~ 36401339 (-) True G79073
TU105830 lncRNA upstream 58497 36418077 ~ 36418387 (-) True G79080
TU105834 lncRNA upstream 65546 36425126 ~ 36425948 (-) True G79084
TU105845 lncRNA upstream 87068 36446648 ~ 36713564 (-) False G79091
TU105849 lncRNA upstream 89900 36449480 ~ 36685995 (-) True G79092
XM_039807335.1 mRNA downstream 31521 36192330 ~ 36317708 (-) True LOC120563179
XM_039807336.1 mRNA downstream 32129 36192330 ~ 36317100 (-) False LOC120563179
XM_039807180.1 mRNA downstream 258782 36075620 ~ 36090447 (-) False LOC120563092
XM_039806168.1 mRNA upstream 192864 36552444 ~ 36559464 (-) True LOC120562455
XM_039807342.1 mRNA upstream 359913 36719493 ~ 36731530 (-) True LOC120563186
XM_039807343.1 mRNA upstream 359924 36719504 ~ 36748238 (-) False LOC120563186
XM_039807054.1 mRNA upstream 481921 36841501 ~ 36852068 (-) True LOC120563048
XM_039806173.1 mRNA upstream 508089 36867669 ~ 36894638 (-) True kiaa0319
TU105756 other downstream 243554 36102997 ~ 36105675 (-) True G79034
TU105304 other downstream 322687 36024731 ~ 36026542 (-) True G78733
XR_005639861.1 other downstream 1039832 35300967 ~ 35309397 (-) False plekhf2
TU104958 other downstream 1171990 35173866 ~ 35177239 (-) True G78496
unassigned_transcript_360 other downstream 1213068 35136090 ~ 35136161 (-) True trnap-cgg_2
TU105912 other upstream 304962 36664542 ~ 36748224 (-) False LOC120563186
TU105962 other upstream 748403 37107983 ~ 37206266 (-) False LOC120562574
XR_005639615.1 other upstream 1136082 37495662 ~ 37519394 (-) False LOC120561551
TU106375 other upstream 1424251 37783831 ~ 37793780 (-) False LOC120562472
TU106409 other upstream 1610907 37970487 ~ 37971348 (-) False LOC120562474

Expression Profile