RNA id: TU106012



Basic Information


Item Value
RNA id TU106012
length 335
lncRNA type sense_over
GC content 0.49
exon number 2
gene id G79197
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36968666 ~ 37014737 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacagacacacatacagacacacacacagacacacacacagacacacagacacacatacagacacacacacacacgacacacgaacacacagacacacatacagacacacacacacacacacacacacacacacacagacacacagacacacatacacacacacacacacacacagacacacacacagacacacagacacacatacagacacacacacacacacagacacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacagagacacacacacacacacacacacacacagacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105878 lncRNA downstream 22295 36922823 ~ 36970334 (-) False G79112
TU105877 lncRNA downstream 49120 36922823 ~ 36943509 (-) False G79112
TU105973 lncRNA downstream 74807 36904048 ~ 36917822 (-) True G79171
TU105996 lncRNA downstream 92847 36895391 ~ 36899782 (-) True G79182
TU105994 lncRNA downstream 99801 36892063 ~ 36892828 (-) False kiaa0319
TU106018 lncRNA upstream 8 37004550 ~ 37044369 (-) True G79200
TU106021 lncRNA upstream 4824 37009366 ~ 37040445 (-) True G79201
TU106022 lncRNA upstream 4824 37009366 ~ 37010747 (-) False G79201
TU106027 lncRNA upstream 14707 37019249 ~ 37019743 (-) True G79202
TU106038 lncRNA upstream 332920 37337462 ~ 37338405 (-) True G79213
XM_039806173.1 mRNA downstream 97991 36867669 ~ 36894638 (-) True kiaa0319
XM_039807054.1 mRNA downstream 140561 36841501 ~ 36852068 (-) True LOC120563048
XM_039807343.1 mRNA downstream 244391 36719504 ~ 36748238 (-) False LOC120563186
XM_039807342.1 mRNA downstream 261099 36719493 ~ 36731530 (-) True LOC120563186
XM_039806168.1 mRNA downstream 433165 36552444 ~ 36559464 (-) True LOC120562455
XM_039806349.1 mRNA upstream 84282 37088824 ~ 37235129 (-) True LOC120562574
XM_039806351.1 mRNA upstream 244819 37249361 ~ 37315604 (-) True LOC120562575
XM_039804681.1 mRNA upstream 488258 37492800 ~ 37519389 (-) False LOC120561551
XM_039804680.1 mRNA upstream 488258 37492800 ~ 37519389 (-) True LOC120561551
XM_039806178.1 mRNA upstream 519959 37524501 ~ 37529217 (-) True rpp25l
TU105912 other downstream 244405 36664542 ~ 36748224 (-) False LOC120563186
TU105798 other downstream 633049 36349229 ~ 36359580 (-) False creb3l4
TU105799 other downstream 633049 36349229 ~ 36359580 (-) False creb3l4
TU105756 other downstream 886954 36102997 ~ 36105675 (-) True G79034
TU105304 other downstream 966087 36024731 ~ 36026542 (-) True G78733
TU105962 other upstream 103441 37107983 ~ 37206266 (-) False LOC120562574
XR_005639615.1 other upstream 491120 37495662 ~ 37519394 (-) False LOC120561551
TU106375 other upstream 779289 37783831 ~ 37793780 (-) False LOC120562472
TU106409 other upstream 965945 37970487 ~ 37971348 (-) False LOC120562474
TU106430 other upstream 1076341 38080883 ~ 38190801 (-) False G79484

Expression Profile