RNA id: TU106082



Basic Information


Item Value
RNA id TU106082
length 201
lncRNA type intronic
GC content 0.48
exon number 2
gene id G79246
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37533227 ~ 37533485 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


Catgtcctggttctccttctccatcaacaacatgaactcaaggagagggttaacttctcctgctacacacacacatacacaccatgacacacacacacacacacacacaccgtgacacacacacacacacacacacacacacacacacacacacacacacacacacacaaatgccatgacagacagacagacagacagaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106079 lncRNA downstream 2622 37525640 ~ 37530605 (-) True G79243
TU106080 lncRNA downstream 5980 37526905 ~ 37527247 (-) True G79244
TU106035 lncRNA downstream 31674 37501357 ~ 37501553 (-) False LOC120561551
TU106033 lncRNA downstream 39087 37492939 ~ 37494140 (-) False LOC120561551
TU106074 lncRNA downstream 41764 37491056 ~ 37491463 (-) True G79239
TU106334 lncRNA upstream 125047 37658532 ~ 37659319 (-) True G79419
TU106346 lncRNA upstream 198286 37731771 ~ 37732474 (-) True G79431
TU106362 lncRNA upstream 224716 37758201 ~ 37758821 (-) True G79441
TU106359 lncRNA upstream 237220 37770705 ~ 37772596 (-) False LOC120562472
TU106371 lncRNA upstream 245879 37779364 ~ 37796337 (-) False G79443
XM_039806178.1 mRNA downstream 4010 37524501 ~ 37529217 (-) True rpp25l
XM_039804681.1 mRNA downstream 13838 37492800 ~ 37519389 (-) False LOC120561551
XM_039804680.1 mRNA downstream 13838 37492800 ~ 37519389 (-) True LOC120561551
XM_039806351.1 mRNA downstream 217623 37249361 ~ 37315604 (-) True LOC120562575
XM_039806349.1 mRNA downstream 298098 37088824 ~ 37235129 (-) True LOC120562574
XM_039806180.1 mRNA upstream 59275 37592760 ~ 37599647 (-) True LOC120562466
XM_039804913.1 mRNA upstream 96222 37629707 ~ 37632079 (-) True LOC120561711
XM_039806181.1 mRNA upstream 106554 37640039 ~ 37642891 (-) True LOC120562467
XM_039806909.1 mRNA upstream 139336 37672821 ~ 37675013 (-) True LOC120562949
XM_039806908.1 mRNA upstream 148750 37682235 ~ 37685613 (-) True LOC120562948
XR_005639615.1 other downstream 13833 37495662 ~ 37519394 (-) False LOC120561551
TU105962 other downstream 326961 37107983 ~ 37206266 (-) False LOC120562574
TU105912 other downstream 785003 36664542 ~ 36748224 (-) False LOC120563186
TU105798 other downstream 1173647 36349229 ~ 36359580 (-) False creb3l4
TU106375 other upstream 250346 37783831 ~ 37793780 (-) False LOC120562472
TU106409 other upstream 437002 37970487 ~ 37971348 (-) False LOC120562474
TU106430 other upstream 547398 38080883 ~ 38190801 (-) False G79484
TU106471 other upstream 606984 38140469 ~ 38205182 (-) False LOC120562477
TU106470 other upstream 667766 38201251 ~ 38205182 (-) True LOC120562477

Expression Profile