RNA id: TU106210


Basic Information

Item Value
RNA id TU106210
length 444
RNA type TUCP
GC content 0.63
exon number 4
gene id nek11
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38056416 ~ 38145804 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGAGAAGGGAGCAAACAGTTTTTGACCGTGCAACATGTTTTCACGGCTGCCGCAGTCTCCATGGAAACGGGATCAAACACGGAAGTCGTCCCTGAGTCTGCTGCAGGGGAGCTGACGGGATGCCCAGGTTTCAGGAGCTGGAGTCAGGCCAGGCCCCGCCCCCTGGCGCCGGCGGCCTGGTTGCTAAGCGATACAGCATCCTGCGGAGTCTGGGCCGGGGCAGTTTTGGGTCCGTTTACCTGGTTCGGGACAACAGAGCTTCAGACGGAGAGCAGCTGAAGGTGTTGAAGCAGATTCCTGTGGGCGACCTGCGCCCGGACGAGACGGTGCGAGCGACCCAGGAGGCCCAGCTGCTGTCCCAGCTGCACCACCCGGCCATCCTCTCCTTCTACCACAGCTTCCTGGAGCGGGACGCCTTCTGCATCGTCACCGAGTTCTGCCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106199 lncRNA upstream 113042 37942894 ~ 37943374 (+) True G79322
TU106194 lncRNA upstream 180339 37875735 ~ 37876077 (+) True G79317
TU106179 lncRNA upstream 184229 37795660 ~ 37872187 (+) True G79309
TU106180 lncRNA upstream 257338 37795660 ~ 37799078 (+) False G79309
TU106181 lncRNA upstream 257853 37795660 ~ 37798563 (+) False G79309
TU106144 lncRNA downstream 45812 38123461 ~ 38134321 (+) True G79285
TU106147 lncRNA downstream 46226 38123875 ~ 38132652 (+) False G79285
TU106150 lncRNA downstream 49152 38126801 ~ 38128972 (+) True G79286
TU106146 lncRNA downstream 54628 38132277 ~ 38132652 (+) False G79285
TU106148 lncRNA downstream 54628 38132277 ~ 38221749 (+) False G79285
XM_039804778.1 mRNA upstream 168410 37878916 ~ 37888006 (+) True cmtm7
XM_039804901.1 mRNA upstream 210702 37826889 ~ 37845714 (+) True LOC120561705
XM_039804902.1 mRNA upstream 210702 37826982 ~ 37845714 (+) False LOC120561705
XM_039806380.1 mRNA upstream 313950 37734725 ~ 37742466 (+) True zgc:153896
XM_039804711.1 mRNA upstream 336387 37717368 ~ 37720029 (+) True LOC120561575
XM_039806189.1 mRNA downstream 104586 38182235 ~ 38188763 (+) False LOC120562476
XM_039807006.1 mRNA downstream 179554 38257203 ~ 38259035 (+) True LOC120563002
XM_039806192.1 mRNA downstream 190628 38268277 ~ 38270068 (+) True LOC120562479
XM_039807011.1 mRNA downstream 210088 38287737 ~ 38291323 (+) True LOC120563007
XM_039806193.1 mRNA downstream 223805 38301454 ~ 38305892 (+) True LOC120562481
TU106195 other upstream 172466 37878964 ~ 37883950 (+) False cmtm7
TU105717 other upstream 523347 37530690 ~ 37533069 (+) False G79007
TU105719 other upstream 523347 37530690 ~ 37533069 (+) True G79007
TU105685 other upstream 623737 37431171 ~ 37432679 (+) True G78989
TU105558 other upstream 1127545 36926712 ~ 36928871 (+) False G78888
TU106224 other downstream 10327 38087976 ~ 38145778 (+) False nek11
TU106244 other downstream 92405 38170054 ~ 38320607 (+) True G79351
TU106246 other downstream 92405 38170054 ~ 38320429 (+) False G79351
TU106280 other downstream 223776 38301425 ~ 38303688 (+) False LOC120562481
TU106301 other downstream 356344 38433993 ~ 38444670 (+) False cmtm6

Expression Profile