RNA id: XM_039806188.1


Basic Information

Item Value
RNA id XM_039806188.1
length 1592
RNA type mRNA
GC content 0.58
exon number 17
gene id nek11
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38056416 ~ 38145804 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGAGAAGGGAGCAAACAGTTTTTGACCGTGCAACATGTTTTCACGGCTGCCGCAGTCTCCATGGAAACGGGATCAAACACGGAAGTCGTCCCTGAGTCTGCTGCAGGGGAGCTGACGGGATGCCCAGGTTTCAGGAGCTGGAGTCAGGCCAGGCCCCGCCCCCTGGCGCCGGCGGCCTGGTTGCTAAGCGATACAGCATCCTGCGGAGTCTGGGCCGGGGCAGTTTTGGGTCCGTTTACCTGGTTCGGGACAACAGAGCTTCAGACGGAGAGCAGCTGAAGGTGTTGAAGCAGATTCCTGTGGGCGACCTGCGCCCGGACGAGACGGTGCGAGCGACCCAGGAGGCCCAGCTGCTGTCCCAGCTGCACCACCCGGCCATCCTCTCCTTCTACCACAGCTTCCTGGAGCGGGACGCCTTCTGCATCGTCACCGAGTTCTGCCAGGTGTGtctcctctctctctgcaggcgAGTCCTGCACCGAGATCTGAAGGCCAAGAACATCTTCCTGAAACGAAACCTTGTTAAAATCGGTGATTTCGGAGTTTCCTGCCTGCTGATGGGATCATGTGACCTGGCCACCACCTTCACAGGGACGCCGTACTACATGAGCCCCGAGGTGCTGAACCACCAGGGATACGACTCCAAGTCTGACATCTGggctCTGGGCTGCCTGCTCTACGAGATGTGCGTCCTGTCCCACGCCTTCCAGGCTCCCAGCTTCCTGGCGGTGGCGATGAAGATCGTGGAGGGAGAAACGCCGGCGCTGCCCGCTCGCTACTCTGCCGATCTCAACGCCGTCCTGCAGAGGATGCTGCAGAAAGATCCAGCATCCAGACCGTCGGCTGCAGAACTTCTCAAGACCCCCTTCATGGAGGACAACATGAAGAAAATGAAGGACAGGTTTGTGTCGAAAGACGAGAGCAAGAAAGACGCCGAGCTCATCGCCAGGAACATacagaataaaaATCACCTGCAGACGCTGATGGAGAGGTCAGAGGTCGAGCAGATGACGCCCAGAGAGAGAATGAGGCTCCGCAAACTGGAAGCTGCTGACGAGAAGGCAAAGAGactcagGAAACTGGCCGAGGAGAAATACGAAGAGATCCACACCCGCAGGAGGGAACTCAGGAGCcgacattttgaaaaagtcagcCTGGACGTTCTGAACGAGAGCAGAGAGGACGGAGCCTGCCGAAGtcaaccaatcagcatccaGGACCACGGGGGGTCACCAGGAGGTTCGCAGCCAATCCTGATGAAGCAGGAGGACAGCAAGATGTCGGAGTCGGAGGTGCACGatATCCCAGAGGACCCTCAGGCTGCAGAAGTTTATTACAACCAGGACGGATTTGATTCGTGTTCAGAGGACGAAGAGACGACAACACCTGCAGAGACACTCTACCTGTCGGACCCACAGGTCAGTGAGCTGGAGGCCATGATGAAGCACATGCAGAAAGTTCTGGAAGAGGAGCTGAGCGGAGACCCAGAGGAGCCGGAGGCCCCTCAGGGGCCCTCGGTGATCCACAGCAGCCTGCTGCAGACCAGAATCCAACACCTGAGAGAGTGAGTCTCacagaggcttttattttga

Function

GO: NA

KEGG:

id description
K20880 NEK11; NIMA (never in mitosis gene a)-related kinase 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106199 lncRNA upstream 113042 37942894 ~ 37943374 (+) True G79322
TU106194 lncRNA upstream 180339 37875735 ~ 37876077 (+) True G79317
TU106179 lncRNA upstream 184229 37795660 ~ 37872187 (+) True G79309
TU106180 lncRNA upstream 257338 37795660 ~ 37799078 (+) False G79309
TU106181 lncRNA upstream 257853 37795660 ~ 37798563 (+) False G79309
TU106240 lncRNA downstream 5010 38150814 ~ 38189239 (+) True G79349
TU106245 lncRNA downstream 24250 38170054 ~ 38250032 (+) False G79351
TU106248 lncRNA downstream 24250 38170054 ~ 38324620 (+) False G79351
TU106251 lncRNA downstream 36346 38182150 ~ 38188752 (+) True LOC120562476
TU106252 lncRNA downstream 41812 38187616 ~ 38235991 (+) True G79355
XM_039804778.1 mRNA upstream 168410 37878916 ~ 37888006 (+) True cmtm7
XM_039804901.1 mRNA upstream 210702 37826889 ~ 37845714 (+) True LOC120561705
XM_039804902.1 mRNA upstream 210702 37826982 ~ 37845714 (+) False LOC120561705
XM_039806380.1 mRNA upstream 313950 37734725 ~ 37742466 (+) True zgc:153896
XM_039804711.1 mRNA upstream 336387 37717368 ~ 37720029 (+) True LOC120561575
XM_039806189.1 mRNA downstream 36431 38182235 ~ 38188763 (+) False LOC120562476
XM_039807006.1 mRNA downstream 111399 38257203 ~ 38259035 (+) True LOC120563002
XM_039806192.1 mRNA downstream 122473 38268277 ~ 38270068 (+) True LOC120562479
XM_039807011.1 mRNA downstream 141933 38287737 ~ 38291323 (+) True LOC120563007
XM_039806193.1 mRNA downstream 155650 38301454 ~ 38305892 (+) True LOC120562481
TU106195 other upstream 172466 37878964 ~ 37883950 (+) False cmtm7
TU105717 other upstream 523347 37530690 ~ 37533069 (+) False G79007
TU105719 other upstream 523347 37530690 ~ 37533069 (+) True G79007
TU105685 other upstream 623737 37431171 ~ 37432679 (+) True G78989
TU105558 other upstream 1127545 36926712 ~ 36928871 (+) False G78888
TU106244 other downstream 24250 38170054 ~ 38320607 (+) True G79351
TU106246 other downstream 24250 38170054 ~ 38320429 (+) False G79351
TU106280 other downstream 155621 38301425 ~ 38303688 (+) False LOC120562481
TU106301 other downstream 288189 38433993 ~ 38444670 (+) False cmtm6
TU106613 other downstream 520468 38666272 ~ 38667524 (+) False G79605

Expression Profile