RNA id: TU106370



Basic Information


Item Value
RNA id TU106370
length 654
lncRNA type intronic
GC content 0.44
exon number 4
gene id G79443
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37779364 ~ 37831558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacacacacacacacacacacacacacacacacacacacacacagaggacacacacacacacacacacacacacacacacagagacacacacacaaacacacacagagacacacacaacacacacagagacacacacacacacacacagagacacacacacacacaaacacaacagagacacaagagacagacacacacacacacacacacagagacacacacacacagacacacacacacacacacacacagacagacacacacacacacacagacagacagacacacacacacacacacagacacacacacacacacacagagacagacacacacacacacacacacacacagagagacagacacacacacagagacagacagacacacacacacacacagagacagacacacacagacacacacacacaaacatgcagagacagacagctacatacacacagacacacacacacacacaaacatgcagagacagacagctacatacacacacactcacacacacagacacacacacacacacacacagagacagaccaaAAAACGctgcttttattattattatatttattattattattattattattattattattattattcatcaaCATAAATCATTAACCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106359 lncRNA downstream 22833 37770705 ~ 37772596 (-) False LOC120562472
TU106362 lncRNA downstream 36608 37758201 ~ 37758821 (-) True G79441
TU106346 lncRNA downstream 62955 37731771 ~ 37732474 (-) True G79431
TU106334 lncRNA downstream 136110 37658532 ~ 37659319 (-) True G79419
TU106082 lncRNA downstream 261944 37533227 ~ 37533485 (-) True G79246
TU106353 lncRNA upstream 106 37796816 ~ 37797945 (-) True G79433
TU106378 lncRNA upstream 30114 37826824 ~ 37866047 (-) True G79448
TU106397 lncRNA upstream 95225 37891935 ~ 37899984 (-) True G79463
XR_005639805.1 lncRNA upstream 108872 37905582 ~ 37911125 (-) True LOC120562672
TU106414 lncRNA upstream 227887 38024597 ~ 38024811 (-) True G79478
XM_039806379.1 mRNA downstream 65363 37725589 ~ 37730066 (-) True mrps12
XM_039806182.1 mRNA downstream 100023 37693717 ~ 37695406 (-) True LOC120562468
XM_039806908.1 mRNA downstream 109816 37682235 ~ 37685613 (-) True LOC120562948
XM_039806909.1 mRNA downstream 120416 37672821 ~ 37675013 (-) True LOC120562949
XM_039806181.1 mRNA downstream 152538 37640039 ~ 37642891 (-) True LOC120562467
XM_039806185.1 mRNA upstream 54451 37851161 ~ 37854822 (-) True si:dkey-11p23.7
XM_039806186.1 mRNA upstream 161739 37958449 ~ 37971199 (-) True LOC120562474
XM_039806190.1 mRNA upstream 404835 38201545 ~ 38204728 (-) False LOC120562477
XM_039807023.1 mRNA upstream 415110 38211820 ~ 38230481 (-) True LOC120563013
XM_039807022.1 mRNA upstream 415110 38211820 ~ 38219193 (-) False LOC120563013
TU106375 other downstream 1649 37783831 ~ 37793780 (-) False LOC120562472
XR_005639615.1 other downstream 276035 37495662 ~ 37519394 (-) False LOC120561551
TU105962 other downstream 589163 37107983 ~ 37206266 (-) False LOC120562574
TU105912 other downstream 1047205 36664542 ~ 36748224 (-) False LOC120563186
TU105798 other downstream 1435849 36349229 ~ 36359580 (-) False creb3l4
TU106409 other upstream 173777 37970487 ~ 37971348 (-) False LOC120562474
TU106430 other upstream 284173 38080883 ~ 38190801 (-) False G79484
TU106471 other upstream 343759 38140469 ~ 38205182 (-) False LOC120562477
TU106470 other upstream 404541 38201251 ~ 38205182 (-) True LOC120562477
TU106520 other upstream 524301 38321011 ~ 38324210 (-) False LOC120562482

Expression Profile