RNA id: TU106433



Basic Information


Item Value
RNA id TU106433
length 356
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G79484
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38063698 ~ 38221760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtcctgtgtgtgtcttgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtctgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106421 lncRNA downstream 28332 38058112 ~ 38058431 (-) True G79483
XR_005639919.1 lncRNA downstream 36228 38045995 ~ 38050535 (-) True LOC120563195
TU106415 lncRNA downstream 51912 38034213 ~ 38034851 (-) True G79479
TU106414 lncRNA downstream 61952 38024597 ~ 38024811 (-) True G79478
XR_005639805.1 lncRNA downstream 175638 37905582 ~ 37911125 (-) True LOC120562672
TU106458 lncRNA upstream 15959 38148610 ~ 38149340 (-) False G79495
TU106459 lncRNA upstream 15959 38148610 ~ 38149340 (-) True G79495
TU106454 lncRNA upstream 16144 38148795 ~ 38149340 (-) False G79495
TU106455 lncRNA upstream 16144 38148795 ~ 38149340 (-) False G79495
TU106460 lncRNA upstream 16144 38148795 ~ 38149340 (-) False G79495
XM_039806186.1 mRNA downstream 115564 37958449 ~ 37971199 (-) True LOC120562474
XM_039806185.1 mRNA downstream 231941 37851161 ~ 37854822 (-) True si:dkey-11p23.7
XM_039806184.1 mRNA downstream 289997 37744084 ~ 37796766 (-) True LOC120562472
XM_039806379.1 mRNA downstream 356697 37725589 ~ 37730066 (-) True mrps12
XM_039806182.1 mRNA downstream 391357 37693717 ~ 37695406 (-) True LOC120562468
XM_039806190.1 mRNA upstream 68894 38201545 ~ 38204728 (-) False LOC120562477
XM_039807023.1 mRNA upstream 79169 38211820 ~ 38230481 (-) True LOC120563013
XM_039807022.1 mRNA upstream 79169 38211820 ~ 38219193 (-) False LOC120563013
XM_039806191.1 mRNA upstream 96907 38229558 ~ 38250551 (-) True dcst1
XM_039806194.1 mRNA upstream 186293 38318944 ~ 38324284 (-) True LOC120562482
TU106409 other downstream 115415 37970487 ~ 37971348 (-) False LOC120562474
TU106375 other downstream 292983 37783831 ~ 37793780 (-) False LOC120562472
XR_005639615.1 other downstream 567369 37495662 ~ 37519394 (-) False LOC120561551
TU105962 other downstream 880497 37107983 ~ 37206266 (-) False LOC120562574
TU105912 other downstream 1338539 36664542 ~ 36748224 (-) False LOC120563186
TU106471 other upstream 7818 38140469 ~ 38205182 (-) False LOC120562477
TU106470 other upstream 68600 38201251 ~ 38205182 (-) True LOC120562477
TU106520 other upstream 188360 38321011 ~ 38324210 (-) False LOC120562482
TU106776 other upstream 539351 38672002 ~ 38680464 (-) False nudt17
TU106828 other upstream 774129 38906780 ~ 38908021 (-) False G79767

Expression Profile