RNA id: TU106595


Basic Information

Item Value
RNA id TU106595
length 376
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G79587
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39300168 ~ 39301388 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTGATATTAGAGCTGAAGTAGGTAACTAAGGGACTATATTAGAGCTGAAGTAGGTAACTAAGGGACTGATATTAGAGCTGAAGTAGGTAACTAAGG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106600 lncRNA upstream 67949 39229871 ~ 39232219 (+) True G79592
TU106723 lncRNA upstream 105176 39193980 ~ 39194992 (+) True G79686
TU106722 lncRNA upstream 106546 39191434 ~ 39193622 (+) True G79685
TU106716 lncRNA upstream 163412 39136486 ~ 39136756 (+) True G79679
XR_005639901.1 lncRNA upstream 178216 39120310 ~ 39121952 (+) True LOC120563035
TU106591 lncRNA downstream 20044 39321432 ~ 39323436 (+) False LOC120563019
XR_005639898.1 lncRNA downstream 33963 39335351 ~ 39335951 (+) True LOC120563032
XR_005639899.1 lncRNA downstream 58086 39359474 ~ 39360686 (+) True LOC120563033
TU106750 lncRNA downstream 78900 39380288 ~ 39381667 (+) False G79710
TU106752 lncRNA downstream 78900 39380288 ~ 39381628 (+) True G79710
XM_039806201.1 mRNA upstream 21665 39265833 ~ 39278503 (+) True LOC120562489
XM_039807004.1 mRNA upstream 201255 38594045 ~ 39098913 (+) True LOC120562999
XM_039807035.1 mRNA upstream 269334 39020810 ~ 39030834 (+) False LOC120563022
XM_039807036.1 mRNA upstream 269334 39020813 ~ 39030834 (+) True LOC120563022
XM_039807037.1 mRNA upstream 269334 39020813 ~ 39030834 (+) False LOC120563022
XM_039806202.1 mRNA downstream 779 39302167 ~ 39306087 (+) False dcst2
XM_039807026.1 mRNA downstream 11251 39312639 ~ 39346432 (+) True LOC120563015
XM_039807030.1 mRNA downstream 20242 39321630 ~ 39331516 (+) True LOC120563019
XM_039807020.1 mRNA downstream 90560 39391948 ~ 39419673 (+) True LOC120563011
XM_039807012.1 mRNA downstream 123940 39425328 ~ 39427120 (+) True LOC120563008
TU106631 other upstream 589159 38691646 ~ 38711009 (+) True G79615
TU106613 other upstream 632644 38666272 ~ 38667524 (+) False G79605
TU106301 other upstream 855498 38433993 ~ 38444670 (+) False cmtm6
TU106246 other upstream 979739 38170054 ~ 38320429 (+) False G79351
TU106594 other downstream 651 39302039 ~ 39304070 (+) True dcst2
TU106586 other downstream 12601 39313989 ~ 39321325 (+) False LOC120563015
TU106757 other downstream 132073 39433461 ~ 39454292 (+) True G79713
TU106759 other downstream 132073 39433461 ~ 39454292 (+) False G79713
TU106769 other downstream 159060 39460448 ~ 39463841 (+) True G79722

Expression Profile