RNA id: TU106662


Basic Information

Item Value
RNA id TU106662
length 369
lncRNA type read_through
GC content 0.50
exon number 2
gene id G79639
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38886728 ~ 38887198 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacacacacacacacacagacacactcacacacacacacacacacacacacacacacacacacacacacacacacacaccccacacacacacacacacacacacacaccacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacaacacacacacacacagagacacactcacacacagacacacacacacagagacacacacacacacacacacacacacacacagacacacacacagacacacacagagacacacacacacacacacacacacacacacaaacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106652 lncRNA upstream 8726 38874927 ~ 38878002 (+) True G79635
TU106645 lncRNA upstream 33620 38852594 ~ 38853108 (+) True G79628
TU106642 lncRNA upstream 80244 38804573 ~ 38806484 (+) True G79625
TU106633 lncRNA upstream 86090 38716388 ~ 38800638 (+) True G79617
TU106639 lncRNA upstream 89571 38796618 ~ 38797157 (+) True G79623
TU106687 lncRNA downstream 88204 38975402 ~ 39007004 (+) True G79653
TU106692 lncRNA downstream 121442 39008640 ~ 39008890 (+) True G79657
TU106695 lncRNA downstream 133741 39020939 ~ 39022181 (+) True G79660
TU106602 lncRNA downstream 207692 39094890 ~ 39098612 (+) False LOC120562999
XR_005639901.1 lncRNA downstream 233112 39120310 ~ 39121952 (+) True LOC120563035
XM_039807015.1 mRNA upstream 106368 38685779 ~ 38780360 (+) False cpne4a
XM_039807017.1 mRNA upstream 106368 38685779 ~ 38780360 (+) False cpne4a
XM_039807016.1 mRNA upstream 106368 38697532 ~ 38780360 (+) True cpne4a
XM_039807024.1 mRNA upstream 294233 38581518 ~ 38592495 (+) True LOC120563014
XM_039807025.1 mRNA upstream 295832 38581518 ~ 38590896 (+) False LOC120563014
XM_039807032.1 mRNA downstream 107955 38995153 ~ 39009576 (+) True LOC120563021
XM_039807033.1 mRNA downstream 107956 38995154 ~ 39009576 (+) False LOC120563021
XM_039807034.1 mRNA downstream 107973 38995171 ~ 39009576 (+) False LOC120563021
XM_039807035.1 mRNA downstream 133612 39020810 ~ 39030834 (+) False LOC120563022
XM_039807036.1 mRNA downstream 133615 39020813 ~ 39030834 (+) True LOC120563022
TU106631 other upstream 175719 38691646 ~ 38711009 (+) True G79615
TU106613 other upstream 219204 38666272 ~ 38667524 (+) False G79605
TU106301 other upstream 442058 38433993 ~ 38444670 (+) False cmtm6
TU106246 other upstream 566299 38170054 ~ 38320429 (+) False G79351
TU106594 other downstream 414841 39302039 ~ 39304070 (+) True dcst2
TU106586 other downstream 426791 39313989 ~ 39321325 (+) False LOC120563015
TU106757 other downstream 546263 39433461 ~ 39454292 (+) True G79713
TU106759 other downstream 546263 39433461 ~ 39454292 (+) False G79713
TU106769 other downstream 573250 39460448 ~ 39463841 (+) True G79722

Expression Profile